Class | Bio::DDBJ::REST::Blast
In: | lib/bio/io/ddbjrest.rb
Parent: | WABItemplate

### Description

DDBJ (DNA DataBank of Japan) BLAST web service. See below for details and examples.

Users normally would want to use searchParamAsync or searchParallelAsync with RequestManager.

- xml.nig.ac.jp/wabi/Method?serviceName=Blast&mode=methodList&lang=en

### Methods

extractPosition getSupportDatabaseList searchParallel searchParallelAsync searchParam searchParamAsync searchSimple searchSimpleAsync

### Public Instance methods

extractPosition(result)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=extractPosition&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 203
    203:       def extractPosition(result); end

getSupportDatabaseList()

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=getSupportDatabaseList&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 207
    207:       def getSupportDatabaseList(); end

searchParallel(program, database, query, param)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchParallel&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 211
    211:       def searchParallel(program, database, query, param); end

searchParallelAsync(program, database, query, param)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchParallelAsync&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 215
    215:       def searchParallelAsync(program, database,
    216:                               query, param); end

searchParam(program, database, query, param)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchParam&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 220
    220:       def searchParam(program, database, query, param); end

searchParamAsync(program, database, query, param)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchParamAsync&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 224
    224:       def searchParamAsync(program, database,
    225:                            query, param); end

searchSimple(program, database, query)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchSimple&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 229
    229:       def searchSimple(program, database, query); end

searchSimpleAsync(program, database, query)

see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=Blast&methodName=searchSimpleAsync&mode=methodDetail

[Source]

         # File lib/bio/io/ddbjrest.rb, line 233
    233:       def searchSimpleAsync(program, database, query); end

[Validate]