## Uses of Class
org.biojava.bio.symbol.SoftMaskedAlphabet

Packages that use SoftMaskedAlphabet
org.biojava.bio.symbol: Representation of the Symbols that make up a sequence, and locations within them.

Uses of SoftMaskedAlphabet in org.biojava.bio.symbol

Methods in org.biojava.bio.symbol that return SoftMaskedAlphabet
`static SoftMaskedAlphabet` `SoftMaskedAlphabet.getInstance(FiniteAlphabet alphaToMask)` Generates a soft masked Alphabet where lowercase tokens are assumed to be soft masked.
`static SoftMaskedAlphabet` `SoftMaskedAlphabet.getInstance(FiniteAlphabet alphaToMask, SoftMaskedAlphabet.MaskingDetector maskingDetector)` Creates a compound alphabet that is a hybrid of the alphabet that is to be soft masked and a binary alphabet that indicates if any `Symbol` is soft masked or not.