## Uses of Class
org.biojava.utils.ChangeType

Packages that use ChangeType
org.biojava.bio: The core classes that will be used throughout the bio packages.
org.biojava.bio.alignment: Classes to generate and describe sequence alignments.
org.biojava.bio.dist: Probability distributions over Alphabets.
org.biojava.bio.dp: HMM and Dynamic Programming Algorithms.
org.biojava.bio.gui.sequence: Graphical displays of biological sequences and associated annotations.
org.biojava.bio.program.das: Development client for the Distributed Annotation System.
org.biojava.bio.program.homologene: Support classes for Homologene data.
org.biojava.bio.search: Interfaces and classes for representing sequence similarity search results.
org.biojava.bio.seq: Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.db: Collections of biological sequence data.
org.biojava.bio.seq.distributed: Sequences and SequenceDBs which are composed from data taken from a number of data sources.
org.biojava.bio.seq.homol: The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl: Standard in-memory implementations of `Sequence` and `Feature`.
org.biojava.bio.seq.projection: Code for projecting Feature objects and systematically altering their properties.
org.biojava.bio.symbol: Representation of the Symbols that make up a sequence, and locations within them.
org.biojava.bio.taxa: Taxonomy object for representing species information.
org.biojava.ontology: A general-purpose API for ontologies.
org.biojava.utils: Miscellaneous utility classes used by other BioJava components.
org.biojava.utils.cache: A simple cache system with pluggable caching behaviours.
org.biojavax: The Biojava extensions packages, classes that extend the core biojava functionality
org.biojavax.bio: Classes to represent biological entities and their relationships.
org.biojavax.bio.db: Interactions between biojavax objects and a DB.
org.biojavax.bio.seq: Rich implementations of Sequences, Locations and Features.
org.biojavax.bio.taxa: Objects that model the NCBI taxonomy schema as described in the BioSQL schema.
org.biojavax.ga: Classes to provide a genetic algorithm framework
org.biojavax.ga.functions: GA functions
org.biojavax.ontology: Extensions to the biojava ontology model that represent BioSQL ontology.

Uses of ChangeType in org.biojava.bio

Fields in org.biojava.bio declared as ChangeType
`static ChangeType` `Annotatable.ANNOTATION` Signals that the associated Annotation has altered in some way.
`static ChangeType` `MergeAnnotation.ANNOTATION_ADD` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` `MergeAnnotation.ANNOTATION_CHANGED` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` `MergeAnnotation.ANNOTATION_REMOVE` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` `Annotation.PROPERTY` This type symbolizes that one or more properties have changed.

Methods in org.biojava.bio with parameters of type ChangeType
`protected ChangeSupport` `OverlayAnnotation.getChangeSupport(ChangeType changeType)`
`protected ChangeSupport` `MergeAnnotation.getChangeSupport(ChangeType changeType)`

Uses of ChangeType in org.biojava.bio.alignment

Fields in org.biojava.bio.alignment declared as ChangeType
`static ChangeType` `ARAlignment.ADD_LABEL`
`static ChangeType` `EditableAlignment.GAPS`
`static ChangeType` `EditableAlignment.LOCATION`
`static ChangeType` `ARAlignment.REMOVE_LABEL`

Uses of ChangeType in org.biojava.bio.dist

Fields in org.biojava.bio.dist declared as ChangeType
`static ChangeType` `Count.COUNTS` Whenever a component count changes the values that would be returned by getCount, they should fire a ChangeEvent with this object as the type.
`static ChangeType` `Distribution.NULL_MODEL` Whenever the null model distribution changes the values that would be returned by getWeight, either by being edited or by being replaced, a ChangeEvent with this object as the type should be thrown.
`static ChangeType` `Distribution.WEIGHTS` Whenever a distribution changes the values that would be returned by getWeight, they should fire a ChangeEvent with this object as the type.

Methods in org.biojava.bio.dist with parameters of type ChangeType
`protected ChangeSupport` `TranslatedDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `AbstractOrderNDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `AbstractDistribution.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.dp

Fields in org.biojava.bio.dp declared as ChangeType
`static ChangeType` `EmissionState.ADVANCE` This signals that the advance array has been altered.
`static ChangeType` `MarkovModel.ARCHITECTURE` Signals that the architecture of the model is changing.
`static ChangeType` `EmissionState.DISTRIBUTION` This signals that the distribution associate with an EmissionState has been altered.
`static ChangeType` `MarkovModel.PARAMETER` Signals that one or more parameters have altered.

Methods in org.biojava.bio.dp with parameters of type ChangeType
`protected ChangeSupport` `SimpleMarkovModel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SimpleEmissionState.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.gui.sequence

Fields in org.biojava.bio.gui.sequence declared as ChangeType
`static ChangeType` `TickFeatureRenderer.DEPTH`
`static ChangeType` `AbstractBeadRenderer.DEPTH` Constant `DEPTH` indicating a change to the depth of the renderer.
`static ChangeType` `AbiTraceRenderer.DEPTH`
`static ChangeType` `PeptideDigestRenderer.DIGEST`
`static ChangeType` `AbstractPeptideDigestRenderer.DIGEST`
`static ChangeType` `AbstractBeadRenderer.DISPLACEMENT` Constant `DISPLACEMENT` indicating a change to the Y-axis displacement of the features.
`static ChangeType` `FeatureBlockSequenceRenderer.FEATURE_COLLAPSING`
`static ChangeType` `FeatureBlockSequenceRenderer.FEATURE_RENDERER`
`static ChangeType` `TickFeatureRenderer.FILL`
`static ChangeType` `BasicFeatureRenderer.FILL`
`static ChangeType` `AbstractBeadRenderer.FILL` Constant `FILL` indicating a change to the fill of the features.
`static ChangeType` `PairwiseFilteringRenderer.FILTER` Constant `FILTER` indicating a change to the renderer's filter.
`static ChangeType` `FilteringRenderer.FILTER`
`static ChangeType` `RectangularBeadRenderer.HEIGHTSCALING` Constant `HEIGHTSCALING` indicating a change to the feature height scaling policy.
`static ChangeType` `SimpleLabelRenderer.LABEL`
`static ChangeType` `AlignmentRenderer.LABEL`
`static ChangeType` `FeatureLabelRenderer.LABEL_MAKER`
`static ChangeType` `SequenceRenderContext.LAYOUT`
`static ChangeType` `OffsetRulerRenderer.OFFSET`
`static ChangeType` `TickFeatureRenderer.OUTLINE`
`static ChangeType` `PairwiseDiagonalRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the fill of the features.
`static ChangeType` `CrosshairRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the crosshair paint.
`static ChangeType` `BasicFeatureRenderer.OUTLINE`
`static ChangeType` `AbstractBeadRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the outline paint of the features.
`static ChangeType` `PaddingRenderer.PADDING` Event type for when the size of the padding changes.
`static ChangeType` `EllipticalBeadRenderer.RATIO` Constant `RATIO` indicating a change to the minimum allowed ratio of long axis to short axis of the features.
`static ChangeType` `PairwiseFilteringRenderer.RECURSE` Constant `RECURSE` indicating a change to the renderer's filter recursion flag.
`static ChangeType` `FilteringRenderer.RECURSE`
`static ChangeType` `TranslatedSequencePanel.RENDERER` Constant `RENDERER` is a `ChangeType` which indicates a change to the renderer, requiring a layout update.
`static ChangeType` `SequenceRendererWrapper.RENDERER`
`static ChangeType` `SequencePoster.RENDERER` Deprecated.
`static ChangeType` `SequencePanel.RENDERER`
`static ChangeType` `PairwiseSequencePanel.RENDERER` Constant `RENDERER` is a `ChangeType` which indicates a change to the renderer, requiring a layout update.
`static ChangeType` `PairwiseFilteringRenderer.RENDERER` Constant `RENDERER` indicating a change to the renderer.
`static ChangeType` `OverlayRendererWrapper.RENDERER`
`static ChangeType` `LabelledSequenceRenderer.RENDERER`
`static ChangeType` `StackedFeatureRenderer.RENDERERS`
`static ChangeType` `PairwiseOverlayRenderer.RENDERERS` Constant `RENDERERS` indicating a change to the renderers handled by the overlay.
`static ChangeType` `MultiLineRenderer.RENDERERS`
`static ChangeType` `SequenceRenderContext.REPAINT`
`static ChangeType` `BasicFeatureRenderer.SCOOP`
`static ChangeType` `BasicFeatureRenderer.SIZE`
`static ChangeType` `AbstractBeadRenderer.STROKE` Constant `STROKE` indicating a change to the outline stroke of the features.
`static ChangeType` `OffsetRulerRenderer.TICKS`
`static ChangeType` `AbiTraceRenderer.TRACE`
`static ChangeType` `TranslatedSequencePanel.TRANSLATION` Constant `TRANSLATION` is a `ChangeType` which indicates a change to the translation, requiring a paint update.
`static ChangeType` `PairwiseSequencePanel.TRANSLATION` Constant `TRANSLATION` is a `ChangeType` which indicates a change to the translation, requiring a paint update.
`static ChangeType` `LabelledSequenceRenderer.VALUES`

Methods in org.biojava.bio.gui.sequence with parameters of type ChangeType
`void` `TranslatedSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)` `addChangeListener` adds a listener for specific types of change.
`void` `SequencePoster.addChangeListener(ChangeListener cl, ChangeType ct)` Deprecated.
`void` `SequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `PairwiseSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)` `addChangeListener` adds a listener for specific types of change.
`protected ChangeSupport` `TranslatedSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` `SequenceRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SequencePoster.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` `SequencePanel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `PairwiseSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` `PairwiseOverlayRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `PairwiseFilteringRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `PaddingRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `OverlayRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `MultiLineRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `FilteringRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `FeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `BumpedRenderer.getChangeSupport(ChangeType ct)`
`boolean` `TranslatedSequencePanel.isUnchanging(ChangeType ct)`
`boolean` `SequencePoster.isUnchanging(ChangeType ct)` Deprecated.
`boolean` `SequencePanel.isUnchanging(ChangeType ct)`
`boolean` `PairwiseSequencePanel.isUnchanging(ChangeType ct)`
`void` `TranslatedSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)` `removeChangeListener` removes a listener.
`void` `SequencePoster.removeChangeListener(ChangeListener cl, ChangeType ct)` Deprecated.
`void` `SequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `PairwiseSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)` `removeChangeListener` removes a listener.

Uses of ChangeType in org.biojava.bio.program.das

Fields in org.biojava.bio.program.das declared as ChangeType
`static ChangeType` `DASSequence.ANNOTATIONS` Change type which indicates that the set of annotation servers used by this DASSequence has been changed.
`static ChangeType` `ReferenceServer.ANNOTATOR`
`static ChangeType` `DAS.SERVERS`

Methods in org.biojava.bio.program.das with parameters of type ChangeType
`void` `ReferenceServer.addChangeListener(ChangeListener cl, ChangeType ct)`
`protected ChangeSupport` `ReferenceServer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `DASSequence.getChangeSupport(ChangeType ct)`
`boolean` `ReferenceServer.isUnchanging(ChangeType ct)`
`void` `ReferenceServer.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojava.bio.program.homologene

Fields in org.biojava.bio.program.homologene declared as ChangeType
`static ChangeType` `OrthoPairSet.MODIFY`
`static ChangeType` `OrthologueSet.MODIFY`

Uses of ChangeType in org.biojava.bio.search

Methods in org.biojava.bio.search with parameters of type ChangeType
`protected ChangeSupport` `SimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SequenceDBSearchSubHit.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` `SequenceDBSearchResult.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` `SequenceDBSearchHit.getChangeSupport(ChangeType ct)` Deprecated.

Uses of ChangeType in org.biojava.bio.seq

Fields in org.biojava.bio.seq declared as ChangeType
`static ChangeType` `FeatureHolder.FEATURES` Signals that features have been added or removed directly within this FeatureHolder.
`static ChangeType` `Feature.LOCATION` The location of this feature is being altered.
`static ChangeType` `FeatureHolder.SCHEMA` Signals that the schema of this FeatureHolder has changed.
`static ChangeType` `Feature.SOURCE` The source of this feature has altered
`static ChangeType` `Feature.SOURCETERM` The ontological source of this feature has altered
`static ChangeType` `StrandedFeature.STRAND` The strand of this feature is being altered.
`static ChangeType` `Feature.TYPE` The type of this feature has altered.
`static ChangeType` `Feature.TYPETERM` The ontological type of this feature has altered.

Methods in org.biojava.bio.seq with parameters of type ChangeType
`protected ChangeSupport` `SimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `NewSimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `LazyFeatureHolder.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `FeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.db

Fields in org.biojava.bio.seq.db declared as ChangeType
`static ChangeType` `SequenceDBLite.SEQUENCES` Signals that sequences are being added to or remove from the database.

Methods in org.biojava.bio.seq.db with parameters of type ChangeType
`protected ChangeSupport` `SequenceDBWrapper.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.distributed

Fields in org.biojava.bio.seq.distributed declared as ChangeType
`static ChangeType` `DistributedSequenceDB.DATASOURCE`
`static ChangeType` `DistributedSequenceDB.DATASOURCE_SELECTION`

Uses of ChangeType in org.biojava.bio.seq.homol

Fields in org.biojava.bio.seq.homol declared as ChangeType
`static ChangeType` `Homology.ALIGNMENT` Signals that the alignment describing the homologous sequences has changed.
`static ChangeType` `SimilarityPairFeature.SIBLING` The sibling of this feature has altered.

Uses of ChangeType in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl with parameters of type ChangeType
`void` `SubSequence.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `LazyFilterFeatureHolder.addChangeListener(ChangeListener cl, ChangeType ct)`
`protected ChangeSupport` `SimpleSequence.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `SimpleFeature.getChangeSupport(ChangeType ct)`
`boolean` `SubSequence.isUnchanging(ChangeType ct)`
`boolean` `LazyFilterFeatureHolder.isUnchanging(ChangeType ct)`
`void` `SubSequence.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.projection

Methods in org.biojava.bio.seq.projection with parameters of type ChangeType
`void` `ProjectedFeature.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `ReparentContext.addChangeListener(Feature f, ChangeListener cl, ChangeType ct)`
`void` `ProjectionContext.addChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct)` Add a ChangeListener to a projected feature.
`boolean` `ProjectedFeature.isUnchanging(ChangeType ct)`
`void` `ProjectedFeature.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `ReparentContext.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct)`
`void` `ProjectionContext.removeChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct)` Remove a ChangeListener from a projected feature.

Uses of ChangeType in org.biojava.bio.symbol

Fields in org.biojava.bio.symbol declared as ChangeType
`static ChangeType` `Alignment.CONTENT` Signals that SymbolLists will be added to or removed from an alignment.
`static ChangeType` `SymbolList.EDIT` Signals that the SymbolList is being edited.
`static ChangeType` `AlphabetIndex.INDEX` Indicates that the index is changing, probably due to the underlying alphabet changing.
`static ChangeType` `Alphabet.PARSERS` This signals that the available parsers have changed.
`static ChangeType` `Alphabet.SYMBOLS` This ChangeType indicates that some symbols have been added or removed from the alphabet.

Methods in org.biojava.bio.symbol with parameters of type ChangeType
`protected ChangeSupport` `SimpleAlphabet.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` `AbstractSymbol.getChangeSupport(ChangeType changeType)`

Uses of ChangeType in org.biojava.bio.taxa

Fields in org.biojava.bio.taxa declared as ChangeType
`static ChangeType` `Taxon.CHANGE_COMMON_NAME` Deprecated. Change type to indicate that the common name of this Taxon is changing.
`static ChangeType` `Taxon.CHANGE_SCIENTIFIC_NAME` Deprecated. Change type to indicate that the scientific name of this Taxon is changing.

Methods in org.biojava.bio.taxa with parameters of type ChangeType
`protected ChangeSupport` `AbstractTaxon.getChangeSupport(ChangeType ct)` Deprecated.

Uses of ChangeType in org.biojava.ontology

Fields in org.biojava.ontology declared as ChangeType
`static ChangeType` `Term.ONTOLOGY` ChangeType which indicates that this term's ontology has been altered
`static ChangeType` `Ontology.TERM`
`static ChangeType` `Ontology.TRIPLE`

Methods in org.biojava.ontology with parameters of type ChangeType
`ChangeSupport` `OntologyTerm.Impl.getChangeSupport(ChangeType ct)`
`ChangeSupport` `AbstractTerm.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.utils

Fields in org.biojava.utils declared as ChangeType
`ChangeType` `IndexedChangeHub.ListenerMemento.type`
`static ChangeType` `ChangeType.UNKNOWN` Constant ChangeType field which indicates that a change has occured which can't otherwise be represented.

Methods in org.biojava.utils that return ChangeType
`ChangeType` `ChangeForwarder.Retyper.getType()`
`ChangeType` `ChangeEvent.getType()` Find the type of this event.

Methods in org.biojava.utils with parameters of type ChangeType
`void` `Unchangeable.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `ChangeSupport.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type (and it's subtypes)
`void` `Changeable.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type.
`void` `AbstractChangeable.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `Unchangeable.addForwarder(ChangeForwarder cf, ChangeType ct)`
`void` `IndexedChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct)`
`void` `ChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct)` add a ChangeListener associated with given key.
`protected ChangeSupport` `AbstractChangeable.getChangeSupport(ChangeType ct)` Called to retrieve the ChangeSupport for this object.
`Set` `Unchangeable.getForwarders(ChangeType ct)`
`Set` `Unchangeable.getListeners(ChangeType ct)`
`boolean` `ChangeSupport.hasListeners(ChangeType ct)` Return true if we have listeners registered for a particular change type.
`protected boolean` `AbstractChangeable.hasListeners(ChangeType ct)` Discover if we have listeners registered for a particular change type.
`boolean` `ChangeType.isMatchingType(ChangeType ct)` Return `true` iff `ct` is equal to this type or any of it's supertypes (including ChangeType.UNKNOWN).
`boolean` `Unchangeable.isUnchanging(ChangeType ct)`
`boolean` `ChangeSupport.isUnchanging(ChangeType ct)`
`boolean` `Changeable.isUnchanging(ChangeType ct)` A particular ChangeType can never be raised by this Changeable.
`boolean` `AbstractChangeable.isUnchanging(ChangeType ct)`
`void` `Unchangeable.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `ChangeSupport.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes.
`void` `Changeable.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes.
`void` `AbstractChangeable.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `Unchangeable.removeForwarder(ChangeForwarder cf, ChangeType ct)`
`void` `IndexedChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct)`
`void` `ChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct)` remove a ChangeListener associated with given key.

Constructors in org.biojava.utils with parameters of type ChangeType
`ChangeEvent(Object source, ChangeType type)` Construct a ChangeEvent with no change details.
`ChangeEvent(Object source, ChangeType type, Object change)` Construct a ChangeEvent specifying a new value for a property, or an object to be added to a collection.
`ChangeEvent(Object source, ChangeType type, Object change, Object previous)` Construct a ChangeEvent specifying a new value for a property, and giving the previous value.
`ChangeEvent(Object source, ChangeType type, Object change, Object previous, ChangeEvent chain)` Construct a ChangeEvent to be fired because another ChangeEvent has been received from a property object.
`ChangeForwarder.Retyper(Object source, ChangeSupport changeSupport, ChangeType type)` Create a new Retyper for forwarding events.
`ChangeType(String name, Class clazz, String fname, ChangeType superType)` Construct a new ChangeType.
`ChangeType(String name, Field ourField, ChangeType superType)` Construct a new ChangeType.
`ChangeType(String name, String className, String fieldName, ChangeType superType)`
`IndexedChangeHub.ListenerMemento(ChangeType type, Reference listener)`

Uses of ChangeType in org.biojava.utils.cache

Constructors in org.biojava.utils.cache with parameters of type ChangeType
`ChangeableCache(ChangeType ct)`

Uses of ChangeType in org.biojavax

Fields in org.biojavax declared as ChangeType
`static ChangeType` `Namespace.ACRONYM`
`static ChangeType` `Namespace.AUTHORITY`
`static ChangeType` `DocRef.CROSSREF`
`static ChangeType` `Namespace.DESCRIPTION`
`static ChangeType` `RankedDocRef.LOCATION`
`static ChangeType` `Namespace.NAME`
`static ChangeType` `RankedDocRef.RANK`
`static ChangeType` `RankedCrossRef.RANK`
`static ChangeType` `Note.RANK`
`static ChangeType` `Comment.RANK`
`static ChangeType` `DocRef.REMARK`
`static ChangeType` `Note.TERM`
`static ChangeType` `Namespace.URI`
`static ChangeType` `Note.VALUE`

Uses of ChangeType in org.biojavax.bio

Fields in org.biojavax.bio declared as ChangeType
`static ChangeType` `BioEntry.COMMENT`
`static ChangeType` `BioEntry.DESCRIPTION`
`static ChangeType` `BioEntry.DIVISION`
`static ChangeType` `BioEntry.IDENTIFIER`
`static ChangeType` `BioEntryRelationship.RANK`
`static ChangeType` `BioEntry.RANKEDCROSSREF`
`static ChangeType` `BioEntry.RANKEDDOCREF`
`static ChangeType` `BioEntry.RELATIONS`
`static ChangeType` `BioEntry.SEQVERSION`
`static ChangeType` `BioEntry.TAXON`

Uses of ChangeType in org.biojavax.bio.db

Fields in org.biojavax.bio.db declared as ChangeType
`static ChangeType` `BioEntryDBLite.BIOENTRYS` Signals that sequences are being added to or remove from the database.

Uses of ChangeType in org.biojavax.bio.seq

Fields in org.biojavax.bio.seq declared as ChangeType
`static ChangeType` `RichSequence.CIRCULAR`
`static ChangeType` `RichLocation.CIRCULAR`
`static ChangeType` `RichFeature.CROSSREF`
`static ChangeType` `RichLocation.FEATURE`
`static ChangeType` `RichFeature.LOCATION`
`static ChangeType` `RichFeature.NAME`
`static ChangeType` `RichLocation.NOTE`
`static ChangeType` `RichFeature.PARENT`
`static ChangeType` `RichLocation.RANK`
`static ChangeType` `RichFeatureRelationship.RANK`
`static ChangeType` `RichFeature.RANK`
`static ChangeType` `RichFeature.RELATION`
`static ChangeType` `RichFeature.SOURCETERM`
`static ChangeType` `RichSequence.SYMLISTVERSION`
`static ChangeType` `RichLocation.TERM`
`static ChangeType` `RichFeature.TYPETERM`

Methods in org.biojavax.bio.seq with parameters of type ChangeType
`void` `InfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type. IGNORED
`boolean` `InfinitelyAmbiguousSymbolList.isUnchanging(ChangeType ct)` A particular ChangeType can never be raised by this Changeable. ALWAYS RETURNS TRUE
`void` `InfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes. IGNORED

Uses of ChangeType in org.biojavax.bio.taxa

Fields in org.biojavax.bio.taxa declared as ChangeType
`static ChangeType` `NCBITaxon.GENETICCODE`
`static ChangeType` `NCBITaxon.HIDDEN`
`static ChangeType` `NCBITaxon.LEFTVALUE`
`static ChangeType` `NCBITaxon.MITOGENETICCODE`
`static ChangeType` `NCBITaxon.NAMES`
`static ChangeType` `NCBITaxon.NODERANK`
`static ChangeType` `NCBITaxon.PARENT`
`static ChangeType` `NCBITaxon.RIGHTVALUE`

Uses of ChangeType in org.biojavax.ga

Fields in org.biojavax.ga declared as ChangeType
`static ChangeType` `Organism.CHROMOSOMES`
`static ChangeType` `GeneticAlgorithm.CROSS_OVER_FUNCTION`
`static ChangeType` `GeneticAlgorithm.FITNESS_FUNCTION`
`static ChangeType` `GeneticAlgorithm.FUNCTION`
`static ChangeType` `GeneticAlgorithm.MUTATION_FUNCTION`
`static ChangeType` `Population.NAME`
`static ChangeType` `Organism.NAME`
`static ChangeType` `Population.ORGANISMS`
`static ChangeType` `GeneticAlgorithm.POPULATION`
`static ChangeType` `GeneticAlgorithm.SELECTION_FUNCTION`

Uses of ChangeType in org.biojavax.ga.functions

Fields in org.biojavax.ga.functions declared as ChangeType
`static ChangeType` `CrossOverFunction.CROSS_PROB`
`static ChangeType` `CrossOverFunction.MAX_CROSSES`
`static ChangeType` `MutationFunction.MUTATION_PROBS`
`static ChangeType` `MutationFunction.MUTATION_SPECTRUM`

Methods in org.biojavax.ga.functions with parameters of type ChangeType
`void` `MutationFunction.NoMutation.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` `CrossOverFunction.NoCross.addChangeListener(ChangeListener cl, ChangeType ct)`
`boolean` `MutationFunction.NoMutation.isUnchanging(ChangeType ct)`
`boolean` `CrossOverFunction.NoCross.isUnchanging(ChangeType t)`
`void` `MutationFunction.NoMutation.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` `CrossOverFunction.NoCross.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojavax.ontology

Fields in org.biojavax.ontology declared as ChangeType
`static ChangeType` `ComparableTerm.DESCRIPTION`
`static ChangeType` `ComparableOntology.DESCRIPTION`
`static ChangeType` `ComparableTriple.DESCRIPTOR`
`static ChangeType` `ComparableTerm.IDENTIFIER`
`static ChangeType` `ComparableTerm.OBSOLETE`
`static ChangeType` `ComparableTerm.RANKEDCROSSREF`
`static ChangeType` `ComparableOntology.TERM`
`static ChangeType` `ComparableOntology.TRIPLE`