## Hierarchy For Package org.biojava.bio.program.ssbind

Package Hierarchies:
  All Packages

## Class Hierarchy

- java.lang.Object
  - org.biojava.bio.program.ssbind.AlphabetResolver
  - org.biojava.bio.program.ssbind.AnnotationFactory
  - org.biojava.bio.program.ssbind.BlastLikeSearchBuilder (implements org.biojava.bio.search.SearchBuilder)
  - org.biojava.bio.program.ssbind.SeqSimilarityAdapter (implements org.xml.sax.ContentHandler)
  - org.biojava.utils.stax.StAXContentHandlerBase (implements org.biojava.utils.stax.StAXContentHandler)
    - org.biojava.bio.program.ssbind.SeqSimilarityStAXAdapter
    - org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler
      - org.biojava.bio.program.ssbind.AlignmentStAXHandler
      - org.biojava.bio.program.ssbind.HeaderStAXHandler
      - org.biojava.bio.program.ssbind.HitStAXHandler
      - org.biojava.bio.program.ssbind.HSPStAXHandler
      - org.biojava.bio.program.ssbind.HSPSummaryStAXHandler
  - org.biojava.bio.program.ssbind.StAXHandlerBinding
  - org.biojava.bio.program.ssbind.ViewSequenceFactory
    - org.biojava.bio.program.ssbind.BlastLikeHomologyBuilder (implements org.biojava.bio.search.SearchContentHandler)
    - org.biojava.bio.program.ssbind.SimilarityPairBuilder (implements org.biojava.bio.search.SearchContentHandler)

## Interface Hierarchy

- org.biojava.bio.program.ssbind.StAXHandlerFactory