## Uses of Package
org.biojava.bio.gui.sequence

Packages that use org.biojava.bio.gui.sequence
org.biojava.bio.gui.sequence: Graphical displays of biological sequences and associated annotations.

Classes in org.biojava.bio.gui.sequence used by org.biojava.bio.gui.sequence
AbstractBeadRenderer `AbstractBeadRenderer` is a an abstract base class for the creation of `FeatureRenderer`s which use a 'string of beads' metaphor for displaying features.
AbstractPeptideDigestRenderer A SequenceRenderer that renders a set of Features that match a FeatureFilter in such a way that they do not overlap in the display.
BasicFeatureRenderer
BeadFeatureRenderer `BeadFeatureRenderer`s use a 'string of beads' metaphor for displaying features.
CircularFeatureRenderer
CircularRenderer Render information from a CircularRendererContext onto a graphics context.
CircularRendererContext A context providing information for rendering sequences into circular coordinate systems.
FeatureLabelRenderer.LabelMaker
FeatureRenderer
FeatureSource A closure that allows AbstractPeptideDigestRenderer implementations to obtain the features of the rendered sequence.
FilteringRenderer
GlyphFeatureRenderer A FeatureRenderer that renders a particular Glyph for Features accepted by a particular FeatureFilter
ImageMap `ImageMap` represents a collection of image map hotspots.
ImageMap.HotSpot `HotSpot`s represent an image map hotspot.
ImageMapRenderer `ImageMapRenderer`s create strings representing `Feature`s suitable for use in HTML image maps.
LabelRenderer The interface for things that can render labels for a line of information about a sequence.
LayeredRenderer `LayeredRenderer` handles the lane offsets for `MultiLineRender`s.
MultiLineRenderer `MultiLineRenderer` is a `SequenceRenderer` which collects a number of other `SequenceRenderer`s each of which render their own view of a `Sequence`.
OverlayMarker This is a dummy interface to permit identification of renderers whose output is to be overlaid along the lines of the Marker Interface pattern.
PairwiseRenderContext `PairwiseRenderContext` encapsulates information required for the rendering of a pair of sequences.
PairwiseSequenceRenderer `PairwiseSequenceRenderer`s render information about the relationship between two sequences.
RectangularBeadRenderer `RectangularBeadRenderer` renders features as simple rectangles.
SequencePanel A panel that displays a Sequence.
SequenceRenderContext A context within which sequence information may be rendered.
SequenceRenderContext.Border The metric object for the 'border' area - the area between the extent of the rendered area and the beginning or end of the sequence.
SequenceRenderer The interface for things that can render a line of information about a sequence.
SequenceRendererWrapper An implementation of SequenceRenderer that delegates rendering to another renderer.
SequenceViewerEvent An event indicating that a mouse gesture was recognised within a widget that renders sequences.
SequenceViewerListener
SequenceViewerMotionListener
SixFrameRenderer Class that handles drawing in six frames for other classes.
ZiggyFeatureRenderer A feature renderer that draws non-contiguous features as a set of boxes joined by zig-zags.