## Package org.biojava.bio.seq.homol

The classes and interfaces for defining sequence similarity and honology.

See:
Description

Interface Summary
Homology: Signifies that two or more features are homologous.
HomologyDB
HomologyFeature
SimilarityPairFeature: `SimilarityPairFeature` describes a pairwise similarity between two nucleotide sequences (as it extends `StrandedFeature`).

Class Summary
HomologyFeature.Template
SimilarityPairFeature.EmptyPairwiseAlignment: `EmptyPairwiseAlignment` empty pairwise alignment which has labels to empty symbol lists.
SimilarityPairFeature.Template: `Template` for construction of `SimilarityPairFeature`s.
SimpleHomology: A no-frills implementation of Homology.

## Package org.biojava.bio.seq.homol Description

The classes and interfaces for defining sequence similarity and honology.