## Package org.biojava.bio.proteomics

Utilities to aid in performing various physical analysis of proteins.

See:
Description

Class Summary
Digest: This class contains methods for calculating the results of proteolytic digestion of a protein sequence this class is not designed to be thread safe
IsoelectricPointCalc: Class that computes isoelectric point for denaturated proteins.
MassCalc: `MassCalc` calculates the mass of peptides which for our purposes are `SymbolList`s which contain `Symbol`sfrom the protein `Alphabet`.
Protease: The protease class stores parameters needed by Digest to digest a protein sequence.
ProteaseManager: Registry and utility methods for Proteases.
StructureTools: Simple access to protein seccondary structure assignments.

## Package org.biojava.bio.proteomics Description

Utilities to aid in performing various physical analysis of proteins.