## Package ssbind

Class Summary
AlignmentBuilder: This filter intercepts the querySequence and subjectSequence events to build an alignment.
CountHits: Prints out a count of the total number of hits in a report.
CountSubHits: Prints out a count of the total number of sub hits in a report.
Echoer: Echo the event stream to stdout with prety indenting.
FilterByValue: Filter complete sub hits by the numerical value of some property.
ListQueries: Lists all query sequence names in the report.
ListSubjects: Lists all subject sequence names in the report.
ProcessBlastReport: Driver script that parses a blast report and pumps the result through a configurable chain of filters and handlers.
PropertyEchoer: Print out the value of a single property.
SubHitBuilder: Build SeqSimilaritySearchSubHit instances from the sub hit info.
SubHitFilter: Abstract base class for things that will allow or disallow whole sub hit messages through to the next handler.