## Uses of Class
org.biojava.bio.chromatogram.graphic.ChromatogramGraphic.Option

Packages that use ChromatogramGraphic.Option
org.biojava.bio.chromatogram.graphic: Tools for displaying chromatograms.

Uses of ChromatogramGraphic.Option in org.biojava.bio.chromatogram.graphic

Fields in org.biojava.bio.chromatogram.graphic declared as ChromatogramGraphic.Option
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_A` Option indicating whether to fill in the callboxes for calls of nucleotide A.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_C` Option indicating whether to fill in the callboxes for calls of nucleotide C.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_G` Option indicating whether to fill in the callboxes for calls of nucleotide G.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_OTHER` Option indicating whether to fill in the callboxes for non-base calls (gaps, ambiguities).
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_SEPARATORS` Option indicating whether to draw vertical lines separating the calls.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_CALL_T` Option indicating whether to fill in the callboxes for calls of nucleotide T.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_TRACE_A` Option indicating whether to draw the chromatogram trace for nucleotide A.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_TRACE_C` Option indicating whether to draw the chromatogram trace for nucleotide C.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_TRACE_G` Option indicating whether to draw the chromatogram trace for nucleotide G.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.DRAW_TRACE_T` Option indicating whether to draw the chromatogram trace for nucleotide T.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.FROM_TRACE_SAMPLE` Option indicating the lowest (leftmost) trace sample that should be drawn.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.HEIGHT_IS_AUTHORITATIVE` Option indicating whether height or vertical scale is the authoritative measure.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.HORIZONTAL_NONLINEAR_SCALER` Option specifying the non-linear scaling function to apply, as embodied in a `ChromatogramNonlinearScaler` object.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.SEPARATOR_COLOR` Option indicating the color that the call separators should be.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.SEPARATOR_STROKE` Option providing the the stroke to use for drawing call separators.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.SUBPATH_LENGTH` To improve performance, the drawing objects for the chromatogram traces are precomputed.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.TO_TRACE_SAMPLE` Option indicating the highest (rightmost) trace sample that should be drawn.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.TRACE_STROKE` Option providing the the stroke to use for drawing the chromatogram traces.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.USE_CUSTOM_STROKE` Option indicating whether to use custom strokes when drawing traces and separators.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.USE_PER_SHAPE_TRANSFORM` Option indicating whether to apply scaling and translation transforms to each shape individually or to apply a single transform to the graphics context.
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.WIDTH_IS_AUTHORITATIVE` Option indicating whether width or horizontal scale is the authoritative measure.

Methods in org.biojava.bio.chromatogram.graphic that return ChromatogramGraphic.Option
`static ChromatogramGraphic.Option` `ChromatogramGraphic.Option.lookup(String desc)` Looks up an `Option` instance based on its string description.

Methods in org.biojava.bio.chromatogram.graphic with parameters of type ChromatogramGraphic.Option
`float` `ChromatogramGraphic.getFloatOption(ChromatogramGraphic.Option opt)` Helper method for converting a `Number`-valued option into a `float` primitive.
`int` `ChromatogramGraphic.getIntOption(ChromatogramGraphic.Option opt)` Helper method for converting a `Number`-valued option into an `int` primitive.
`Object` `ChromatogramGraphic.getOption(ChromatogramGraphic.Option opt)` Returns the current value for the specified option.
`boolean` `ChromatogramGraphic.optionIsTrue(ChromatogramGraphic.Option opt)` Helper method for converting a `Boolean`-valued option into a `boolean` primitive.
`void` `ChromatogramGraphic.setOption(ChromatogramGraphic.Option opt, Object value)` Sets a new value for the specified option.