## Uses of Class
org.biojava.bio.dp.SimpleMarkovModel

Packages that use SimpleMarkovModel
org.biojava.bio.dp: HMM and Dynamic Programming Algorithms.
org.biojava.bio.program.hmmer: Tools for working with profile Hidden Markov Models from the HMMer package.

Uses of SimpleMarkovModel in org.biojava.bio.dp

Subclasses of SimpleMarkovModel in org.biojava.bio.dp
`class` `ProfileHMM`

Uses of SimpleMarkovModel in org.biojava.bio.program.hmmer

Subclasses of SimpleMarkovModel in org.biojava.bio.program.hmmer
`class` `FullHmmerProfileHMM` This is a class for representing the full HMMER generated Profile HMM (including loop states N and C terminal looping states).
`class` `HmmerProfileHMM` This is a class for representing HMMER generated Profile HMM.