## Hierarchy For Package org.biojava.bio.structure.align.helper

Package Hierarchies:
  All Packages

## Class Hierarchy

- java.lang.Object
  - org.biojava.bio.structure.align.helper.AlignTools
  - org.biojava.bio.structure.align.helper.GapArray
  - org.biojava.bio.structure.align.helper.IndexPair
    - org.biojava.bio.structure.align.helper.AligMatEl
  - org.biojava.bio.structure.align.helper.JointFragments