| ## EMBOSS: cutgextract

# Program cutgextract

## Function

Extract data from CUTG

## Description

**************** EDIT HERE ****************

## Usage

Here is a sample session with cutgextract:

    % cutgextract

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## Command line arguments

       Mandatory qualifiers:
      [-directory]         dirlist    CUTG directory

       Optional qualifiers: (none)
       Advanced qualifiers:
       -wildspec           string     Type of codon file

       General qualifiers:
      -help                bool       report command line options. More
                                      information on associated and general
                                      qualifiers can be found with -help -verbose

EMBOSS An error in ajacd.c at line 10820: unknown attribute 'name' for 'directory'

## Input file format

**************** EDIT HERE ****************

## Output file format

**************** EDIT HERE ****************

## Data files

**************** EDIT HERE ****************

## Notes

None.

## References

None.

## Warnings

None.

## Diagnostic Error Messages

None.

## Exit status

It always exits with status 0.

## Known bugs

None.

## See also

Program name | Description
--- | ---
domainer | Build domain coordinate files
nrscope | Converts redundant EMBL-format SCOP file to non-redundant one
pdbtosp | Convert raw swissprot:pdb equivalence file to embl-like format
printsextract | Extract data from PRINTS
prosextract | Builds the PROSITE motif database for patmatmotifs to search
rebaseextract | Extract data from REBASE
scope | Convert raw scop classification file to embl-like format
scopparse | Reads raw scop classifications file and writes embl-like format scop classification file
seqnr | Converts redundant database results to a non-redundant set of hits
tfextract | Extract data from TRANSFAC

## Author(s)

This application was written by Alan Bleasby (ableasby@hgmp.mrc.ac.uk) **************** EDIT HERE ****************

## History

Written (date) - author. **************** EDIT HERE ****************

## Target users

This program is intended to be used by everyone and everything, from naive users to embedded scripts.

## Comments