## Deprecated API

Deprecated Classes
org.biojava.stats.svm.LinearKernel Just use SparseVector.kernel instead...

Deprecated Methods
org.biojava.bio.symbol.SimpleSymbolList.addSymbol(Symbol) Can we make SimpleSymbolList immutable [Thomas Down]
org.biojava.bio.seq.ViewSequence.createFeature(FeatureHolder, Feature.Template) Please use 1-arg createFeature instead.
org.biojava.bio.seq.SimpleSequence.createFeature(FeatureHolder, Feature.Template) Please use new 1-arg createFeature instead.
org.biojava.bio.symbol.AlphabetManager.instance() all AlphabetManager methods have become static