# Genetic Code Table
#
# Obtained from: http://www.ncbi.nlm.nih.gov/collab/FT/genetic_codes.html
# and: http://www3.ncbi.nlm.nih.gov/htbin-post/Taxonomy/wprintgc?mode=c
#
# Differences from the Standard Code: 
# 
#           Code 6       Standard
# 
#  UAA      Gln  Q        Ter  *
#  UAG      Gln  Q        Ter  *
# 
# 
# Systematic Range: 
# 
# Ciliata: Oxytricha and Stylonychia (Hoffman et al.  1995), Paramecium,
# Tetrahymena, Oxytrichidae and probably Glaucoma chattoni. 
# 
# Dasycladaceae: Acetabularia (Schneider et al., 1989) and Batophora
# (Schneider and de Groot, 1991). 
# 
# Diplomonadida: 
# Scope: Hexamita inflata, Diplomonadida ATCC50330, and ATCC50380. 
# Ref.: Keeling, P.J.  and Doolittle, W.F.  1996.  A non-canonical genetic
# code in an early diverging eukaryotic lineage.  The EMBO Journal 15,
# 2285-2290. 
# 
# Comment: 
# 
# The ciliate macronuclear code has not been determined completely.  The
# codon UAA is known to code for Gln only in the Oxytrichidae. 

Genetic Code [6]
 
Ciliate Macronuclear and Dasycladacean
    
AAs  =   FFLLSSSSYYQQCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG
Starts = -----------------------------------M----------------------------
Base1  = TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
Base2  = TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
Base3  = TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 
