| HMM

Hidden markov model analysis

Program name | Description
--- | ---
ealistat | Statistics for multiple alignment files
ehmmalign | Align sequences with an HMM
ehmmbuild | Build HMM
ehmmcalibrate | Calibrate a hidden Markov model
ehmmconvert | Convert between HMM formats
ehmmemit | Extract HMM sequences
ehmmfetch | Extract HMM from a database
ehmmindex | Index an HMM database
ehmmpfam | Align single sequence with an HMM
ehmmsearch | Search sequence database with an HMM