## Hierarchy For Package org.biojava.bio.program.ssbind

Package Hierarchies:
  All Packages

## Class Hierarchy

- class java.lang.Object
  - class org.biojava.bio.program.ssbind.AlphabetResolver
  - class org.biojava.bio.program.ssbind.AnnotationFactory
  - class org.biojava.bio.program.ssbind.BlastLikeSearchBuilder (implements org.biojava.bio.search.SearchBuilder)
  - class org.biojava.bio.program.ssbind.SeqSimilarityAdapter (implements org.xml.sax.ContentHandler)
  - class org.biojava.utils.stax.StAXContentHandlerBase (implements org.biojava.utils.stax.StAXContentHandler)
    - class org.biojava.bio.program.ssbind.SeqSimilarityStAXAdapter
    - class org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler
      - class org.biojava.bio.program.ssbind.AlignmentStAXHandler
      - class org.biojava.bio.program.ssbind.HeaderStAXHandler
      - class org.biojava.bio.program.ssbind.HitStAXHandler
      - class org.biojava.bio.program.ssbind.HSPStAXHandler
      - class org.biojava.bio.program.ssbind.HSPSummaryStAXHandler
  - class org.biojava.bio.program.ssbind.StAXHandlerBinding
  - class org.biojava.bio.program.ssbind.ViewSequenceFactory
    - class org.biojava.bio.program.ssbind.BlastLikeHomologyBuilder (implements org.biojava.bio.search.SearchContentHandler)
    - class org.biojava.bio.program.ssbind.SimilarityPairBuilder (implements org.biojava.bio.search.SearchContentHandler)

## Interface Hierarchy

- interface org.biojava.bio.program.ssbind.StAXHandlerFactory