## Uses of Package
org.biojava.bio.alignment

Packages that use org.biojava.bio.alignment
org.biojava.bio.alignment: Implementation of the `Alignment` interface.

Classes in org.biojava.bio.alignment used by org.biojava.bio.alignment
AbstractULAlignment
AlignmentElement AlignmentElement is a class which represents a SymbolList and its location within an Alignment This is for use in UnequalLengthAlignments and ARAlignments.
ARAlignment ARAlignment is an interface that defines methods for adding and removing seqeunces from an Alignment.
EditableAlignment EditableAlignment is an interface that defines methods for shifting bases within an Alignment.
IllegalAlignmentEditException The usual reason for throwing an IllegalAlignmentEditException is that you are trying to shift a group of bases in such a way that it would require deleting bases.
UnequalLengthAlignment UnequalLengthAlignment has the following behavior.