## Hierarchy For Package org.biojava.bio.seq.ragbag

Package Hierarchies:
  All Packages

## Class Hierarchy

- class java.lang.Object
  - class org.biojava.bio.seq.ragbag.RagbagAbstractSequence (implements org.biojava.bio.seq.Sequence)
    - class org.biojava.bio.seq.ragbag.RagbagAssembly
  - class org.biojava.bio.seq.ragbag.RagbagComponentDirectory.EmptyComponentDirectory (implements org.biojava.bio.seq.ragbag.RagbagComponentDirectory)
  - class org.biojava.bio.seq.ragbag.RagbagFeatureTypeCatcher (implements org.biojava.bio.seq.ragbag.RagbagFilterFactory)
  - class org.biojava.bio.seq.ragbag.RagbagFilteredCachedSeqFactory (implements org.biojava.bio.seq.ragbag.RagbagSequenceFactory)
  - class org.biojava.bio.seq.ragbag.RagbagFixedCacheSeqFactory (implements org.biojava.bio.seq.ragbag.RagbagSequenceFactory)
  - class org.biojava.bio.seq.ragbag.RagbagHashedComponentDirectory (implements org.biojava.bio.seq.ragbag.RagbagComponentDirectory)
  - class org.biojava.bio.seq.ragbag.RagbagIdleSequenceBuilder (implements org.biojava.bio.seq.io.SequenceBuilder)
  - class org.biojava.bio.seq.ragbag.RagbagMap.MapElement
  - class org.biojava.bio.seq.ragbag.RagbagMap.MapEnum (implements java.util.Enumeration)
  - class org.biojava.bio.seq.ragbag.RagbagSoftRefSeqFactory (implements org.biojava.bio.seq.ragbag.RagbagSequenceFactory)
  - class org.biojava.bio.seq.ragbag.RagbagUncachedSeqFactory (implements org.biojava.bio.seq.ragbag.RagbagSequenceFactory)
  - class org.biojava.utils.stax.StAXContentHandlerBase (implements org.biojava.utils.stax.StAXContentHandler)
    - class org.biojava.bio.seq.ragbag.RagbagMap

## Interface Hierarchy

- interface org.biojava.bio.seq.ragbag.RagbagComponentDirectory
- interface org.biojava.bio.seq.ragbag.RagbagFileParserFactory
- interface org.biojava.bio.seq.ragbag.RagbagFilterFactory
- interface org.biojava.bio.seq.ragbag.RagbagSequenceFactory