# These are modules which are deprecated and later removed from the toolkit
                          Version    Version 
Deprecated Modules       Deprecated  Removed Comment
----------------------------------------------------------------------------
Bio::Annotation               1.0      1.1    use Bio::Annotation::Collection
Bio::Tools::Blast             1.0      1.1    use Bio::SearchIO
Bio::Tools::Blast::HSP        1.0      1.1    use Bio::Search::HSP::GenericHSP
Bio::Tools::Blast::Sbjct      1.0      1.1    use Bio::Search::Hit::GenericHit
Bio::Tools::Blast::HTML       1.0      1.1    use Bio::SearchIO::Writer::HTMLWriter
Bio::Tools::WWW               1.1      1.1.1  Just a collection of links
Bio::UnivAln                  1.0      1.1    use Bio::SimpleAlign
Bio::Tools::RestrictionEnzyme 1.5      -      use Bio::Restriction
