| bio-0.4: A bioinformatics library | Source code | Contents | Index

Bio.GFF3.SGD

Documentation

chromosomes :: FeatureHierSequences -> [Feature] | Source

genes :: FeatureHierSequences -> [Feature] | Source

rRNAs :: FeatureHierSequences -> [Feature] | Source

sortExons :: (Error e, MonadError e m) => [Feature] -> m [Feature] | Source

geneSequence :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m (Sequence a) | Source

geneSeqLoc :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m SeqLoc | Source

geneCDSes :: FeatureHierSequences -> Feature -> [Feature] | Source

noncodingSequence :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m (Sequence a) | Source

noncodingSeqLoc :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m SeqLoc | Source

noncodingExons :: FeatureHierSequences -> Feature -> [Feature] | Source

namedSLM :: FeatureHierSequences -> SeqLocMap Feature | Source

geneCDS_SLM :: (Error e, MonadError e m) => FeatureHierSequences -> m (SeqLocMap Feature) | Source

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