flx

Main

Description

Flx is a simple tool to trim 454 Titanium reads down to FLX size, i.e. from 800 flows to 400 flows. This is sometimes useful to investigate the relatvie benefit of Titanium's longer read lengths, and will also serve as a (rather crude) way to improve average sequence quality.

We're using `trimFromTo`, which clips a `ReadBlock` down to specific base positions, and we use `flowToBasePos` to find the base corresponding to flow number 400.