reorder {mva} | R Documentation

## Reorder a dendrogram

### Description

There are many different orderings of a dendrogram that are consistent with the structure imposed. This function takes a dendrogram and a vector of values and reorders the dendrogram in the order of the supplied vector, maintaining the constraints on the dendrogram.

### Usage

    reorder(x, ...)

    ## S3 method for class 'dendrogram':
    reorder(x, wts, ...)

### Arguments

`x` | The object to be reordered
`wts` | The weights for reordering.
`...` | additional arguments

### Details

Using the weights the leaves of the dendrogram are reordered so as to be in an order as consistent as possible with the weights.

### Value

From `reorder.dendrogram` a dendrogram.

### Author(s)

R. Gentleman

### See Also

`heatmap`, `cophenetic`

### Examples

      set.seed(123)
      x <- rnorm(10)
      hc <- hclust(dist(x))
      dd <- as.dendrogram(hc)
      dd.reorder <- reorder(dd, 10:1)

      op <- par(mfcol = 1:2)
      plot(dd, main = "random dendrogram `dd'")
      plot(dd.reorder, main = "reorder(dd, 10:1)")
      par(op)

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