Bio::Tree::Statistics(3)

NAME
Bio::Tree::Statistics - Calculate certain statistics for a Tree

SYNOPSIS
  use Bio::Tree::Statistics;

DESCRIPTION
This should be where Tree statistics are calculated. It was previously where statistics from a Coalescent simulation. Currently it is empty because we have not added any Tree specific statistic calculations to this module yet. We welcome any contributions.

FEEDBACK

  Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org              - General discussion
  http://bioperl.org/MailList.shtml  - About the mailing lists

  Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

  http://bugzilla.bioperl.org/

AUTHOR - Jason Stajich
Email jason@bioperl.org

CONTRIBUTORS
none so far

APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

  new
 Title   : new
 Usage   : my $obj = new Bio::Tree::Statistics();
 Function: Builds a new Bio::Tree::Statistics object
 Returns : Bio::Tree::Statistics
 Args    :

  assess_bootstrap
 Title   : assess_bootstrap
 Usage   : my $tree_with_bs = $stats->assess_bootstrap(\@bs_trees);
 Function: Calculates the bootstrap for internal nodes based on
 Returns : L<Bio::Tree::TreeI>
 Args    : Arrayref of L<Bio::Tree::TreeI>s