# format0.rb

Path: | lib/bio/appl/blast/format0.rb
Last Update: | Thu Nov 19 15:47:02 +0000 2009

# bio/appl/blast/format0.rb - BLAST default output (-m 0) parser

Copyright: | Copyright (C) 2003-2006 GOTO Naohisa <ng@bioruby.org>
License: | The Ruby License

$Id:$

## Description

NCBI BLAST default (-m 0 option) output parser.

## References

- Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
- www.ncbi.nlm.nih.gov/blast/

### Required files

strscan singleton bio/io/flatfile

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