# alignment.rb

Path: | lib/bio/alignment.rb
Last Update: | Thu Nov 19 15:47:02 +0000 2009

# bio/alignment.rb - multiple alignment of sequences

Copyright: | Copyright (C) 2003, 2005, 2006 GOTO Naohisa <ng@bioruby.org>
License: | The Ruby License

     $Id: alignment.rb,v 1.24 2007/12/26 14:08:02 ngoto Exp $

# About Bio::Alignment

Please refer document of Bio::Alignment module.

# References

- Bio::Align::AlignI class of the BioPerl.

doc.bioperl.org/releases/bioperl-1.4/Bio/Align/AlignI.html

- Bio::SimpleAlign class of the BioPerl.

doc.bioperl.org/releases/bioperl-1.4/Bio/SimpleAlign.html

### Required files

tempfile bio/command bio/sequence bio/io/flatfile bio/db/fasta

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