Bio::Structure::Residue - Bioperl structure Object, describes a Residue #add synopsis here This object stores a Bio::Structure::Residue

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Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web: bioperl-bugs@bio.perl.org http://bugzilla.bioperl.org/ Email kris.boulez@algonomics.com The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new()
Title : new() Usage : $residue = Bio::Structure::Residue->new( -id => 'human_id', ); Function: Returns a new Bio::Structure::Residue object from basic constructors. Probably most called from Bio::Structure::IO. Returns : a new Bio::Structure::Residue object

atom()
Title : atom Usage : Function: nothing usefull untill I get symbolic references to do what I want Returns : Args :

add_atom()
Title : add_atom Usage : Function: nothing usefull untill I get symbolic references to do what I want Returns : Args :

chain()
Title : chain Usage : $chain = $residue->chain($chain) Function: Sets the Chain this Residue belongs to Returns : Returns the Chain this Residue belongs to Args : reference to a Chain

id()
Title : id Usage : $residue->id("TRP-35") Function: Gets/sets the ID for this residue Returns : the ID Args : the ID

DESTROY()
Title : DESTROY Usage : Function: destructor ( get rid of circular references ) Returns : Args :

_remove_atoms()
Title : _remove_atoms Usage : Function: Removes the atoms attached to a Residue. Tells the atoms they don't belong to this Residue any more Returns : Args :

_remove_chain()
Title : _remove_chain Usage : Function: Removes the Chain this Residue is atttached to. Returns : Args :

_grandparent()
Title : _grandparent Usage : Function: get/set a symbolic reference to our grandparent Returns : Args :