Bio::SearchIO::Writer::BSMLResultWriter - DESCRIPTION of Object use Bio::SearchIO; my $in = new Bio::SearchIO(-file => 'result.blast', -format => 'blast'); my $out = new Bio::SearchIO(-output_format => 'BSMLResultWriter', -file => ">result.bsml"); while( my $r = $in->next_result ) { $out->write_result($r); } This is a writer to produce BSML for a search result.

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new
Title : new Usage : my $obj = new Bio::SearchIO::Writer::BSMLResultWriter(); Function: Builds a new Bio::SearchIO::Writer::BSMLResultWriter object Returns : an instance of Bio::SearchIO::Writer::BSMLResultWriter Args :

to_string
Purpose : Produces data for each Search::Result::ResultI in a string. : This is an abstract method. For some useful implementations, : see ResultTableWriter.pm, HitTableWriter.pm, : and HSPTableWriter.pm. Usage : print $writer->to_string( $result_obj, @args ); Argument : $result_obj = A Bio::Search::Result::ResultI object : @args = any additional arguments used by your implementation. Returns : String containing data for each search Result or any of its : sub-objects (Hits and HSPs). Throws : n/a