
SAGA FORMAT
alignement  1gpb_ref1.t_coffee_aln10 nseq=5 len=852
T_COFFEE ALIGNMENT
CPU TIME:132940



gpb        -agvenvt-elkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgr
ahpA       sqpifndk-qfqealsrqwqryglnsaaemtprqww----lavsealaem
ygpA       -vkkfnkaedfqdrfidhvettlarslyncddmvayeaasmsirdnlvid
phsg_ecoli -----sve-alkhsiayklmftigkdpvvankhewlnatlfavrdrlver
phsg_haein ------ve-aikksivyklifligrspreasqrdwlnatlhavrdlvteg

gpb        wirtqqhyyekdpkriyylslefymgrtlqntmvnlal-enacdeatyql
ahpA       lraqpfakpvanqrhvnyismefligrltgnnllnlgw-yqdvqdslkay
ygpA       wnktqqkfttrdpkrvyylsleflmgraldnalinmkipremikgaldel
phsg_ecoli wlrsnraqlsqetrqvyylsmefligrtlsnamlslgi-yedvqgaleam
phsg_haein wittarqtraedsrrvyylsmefligrtlsnamiaegi-yglaqealsel

gpb        gldmeeleeieedaglgngglgrlaacfldsmatlglaaygygiryefgi
ahpA       dinltdlleeeidpalgagglgrlaacfldsmatvgqsatgyglnyqygl
ygpA       gfkledvldqepdaglgngglgrlaacfvdsmategipawgyglryeygi
phsg_ecoli glnleelideendpglgngglgrlaacfldslatlglpgrgygirydygm
phsg_haein nvdleevlekevdpglgngglgrlaacfmdsiatlglpgmgygiryeygm

gpb        fnqkicggwqmeeaddwlrygnpwekarpeftlpvhfygrvehts--qga
ahpA       frqsfvdgkqveapddwhrsnypwfrhnealdvqvgiggavtkdg-----
ygpA       faqkiidgyqvetpdywlnsgnpweiernevqipvtfygyvdrpttlsas
phsg_ecoli fkqnivngsqkespdywleygnpwefkrhntrykvrfggriqqeg--kkt
phsg_haein frqkiengqqverpdawlekgapwefirpskrftvefggnihfeg--kkc

gpb        kwvdtqvvlampydtpvpgyrnnvvntmrlwsakapndfnlkdfnvggyi
ahpA       rwepeftitgqawdlpvvgyrngvaqplrlwqathahpfdltkfndgdfl
ygpA       qwiggervlavaydfpvpgfktsnvnnlrlwqarpttefdlnkfnngdyk
phsg_ecoli rwieteeilgvaydqiipgydtdatntlrlwsaqasseinlgkfnqgdyf
phsg_haein iwqdtekvtalaydqmipgyqnnsaatlrlwsahagevfnladfnrgehl

gpb        qavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfks
ahpA       raeqqginaekltkvlypndnhtagkklrlmqqyfqcacsvadilrrhhl
ygpA       nsvaqqqraesitavlypndnfaqgkelrlkqqyfwcaaslhdilrrfkk
phsg_ecoli aavedknhsenvsrvlypddstysgrdvrlrqeyflvsstiqdilsrhyq
phsg_haein aaleehsanknlsrvlypddstwngrelrlrqeyflvsaslqdilrrhkr

gpb        skfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdk
ahpA       a--------grelheladyeviqlndthptiaipellrvlidehqmswdd
ygpA       s--------krpwtefpdqvaiqlndthptlaivelqrvlvdlekldwhe
phsg_ecoli l--------hktydnladkiaihlndthpvlsipemmrllidehqfswdd
phsg_haein t--------hnslenladkvaihlndthpalaipelmrilvddegfewkk

gpb        awevtvktcaytnhtvipealerwpvhlletllprhlqiiyeinqrflnr
ahpA       awaitsktfaytnhtlmpealerwdvklvkgllprhmqiineintrfktl
ygpA       awdivtktfaytnhtvmqealekwprrlfghllprhleiiydinwffled
phsg_ecoli afevccqvfsytnhtlmsealetwpvdmlgkilprhlqiifeindyflkt
phsg_haein awemtrnifsytchtlmsealetwpvemmakilprhlqmifeindhfley

gpb        vaaafpgdvdrlrrmslveegav-krinmahlciagshavngvarihsei
ahpA       vektwpgdekvwaklavvhd----kqvhmanlcvvggfavngvaalhsdl
ygpA       vakkfpkdvdllsrisiieensperqirmaflaivgshkvngvvelhsel
phsg_ecoli lqeqypndtdllgrasiidesng-rrvrmawlavvvshkvngvselhsnl
phsg_haein vrtyvttdndfirrvslieegyq-rkvrmgwlsvvgshkingvaeihsdl

gpb        lkktifkdfyele-phkfqnktngitprrwlvlcnpglaeiiaerig---
ahpA       vvkdlfpeyhqlw-pnkfhnvtngitprrwikqcnpalaalldkslq---
ygpA       ikttifkdfikfygpskfvnvtngitprrwlkqanpslaklisetlndpt
phsg_ecoli mvqslfadfakif-pgrftnvtngvtprrwlavanpslsavldehlg---
phsg_haein mvtstfadfarif-perftnvtngitprrwlavanpqlaalfdkyig---

gpb        eeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylereyk-vh-
ahpA       kewandldqlinlvkladdakfrdlyrvikqankvrlaefvkvrtg-id-
ygpA       eeylldmakltqlekyvedkeflkkwnqvklnnkirlvdlikkendgvdi
phsg_ecoli rnwrtdlsllnelqqhcdfpmvnhavhqaklenkkrlaeyiaqqln-vv-
phsg_haein sewrcdlsqieklkpfaqekafkeavadikfankvklaeyvkselg-ve-

gpb        in----pnslfdvqvkriheykrqllnclhvitly----nrikk----ep
ahpA       in----pqaifdiqikrlheykrqhlnllrilaly----keire----np
ygpA       inreylddtlfdmqvkriheykrqqlnvfgiiyrylamknmlkngasiee
phsg_ecoli vn----pkalfdvqikriheykrqlmnvlhvitry----nrika----dp
phsg_haein ld----phalfdvqvkriheykrqmlnvlhiiary----nemlt----np

gpb        nkfvvpr-tvmiggkaapgyhmakmiiklitaigdvvnhdpvvgdrlrvi
ahpA       qadrvpr-vflfgakaapgyylakniifainkvadvinndplvgdklkvv
ygpA       varkyprkvsifggksapgyymakliiklincvadivnndesiehllkvv
phsg_ecoli dakwvpr-vnifggkaasayymakhiihlindvakvinndpqigdklkvv
phsg_haein ekdwqpr-vfilagkaasayyaakqtihlindvanvinnderlkgrlkvv

gpb        flenyrvslaekvipaadlseqistagteasgtgnmkfmlngaltigtmd
ahpA       flpdycvsaaeklipaadiseqistagkeasgtgnmklalngaltvgtld
ygpA       fvadynvskaeiiipasdlsehistagteasgtsnmkfvmnggliigtvd
phsg_ecoli fipnysvslaqliipaadlseqislagteasgtsnmkfalngaltigtld
phsg_haein fipnysvslaqliipaadiseqislagteasgtsnmkfalngaltlgtld

gpb        ganvemaeeageenffifgmrvedvdrldq-rgynaqeyydripelrqii
ahpA       ganveiaekvgeenififghtvkqvkaila-kgydpvkwrkkdkvldavl
ygpA       ganveitreigednvflfgnlsenveelrynhqyhp---qdlpssldsvl
phsg_ecoli ganvemldhvgadnififgntaeeveelrr-qgykpreyyekdeelhqvl
phsg_haein ganveilenvgednififgntveqveqlrr-egyrsfeyyqndaqlrtvv

gpb        eqlssgffspkqpdlfkdivnmlmhh--drfkvfadyeeyvkcqervsal
ahpA       kelesgkysdgdkhafdqmlhsigkqggdpylvmadfaayveaqkqvdvl
ygpA       syiesgqfspenpnefkplvdsikyh-gdyylvsddfesylathelvdqe
phsg_ecoli tqigsgvfspedpgryrdlvdslinf-gdhyqvladyrsyvdcqdkvdel
phsg_haein dqiiegkfspedpqryhqllqglqyh--dyyqafadfrsyvetqkavdek

gpb        yknp-rewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapde
ahpA       yrdq-eawtraailntarcgmfssdrsirdyqariwqaa--r--------
ygpA       fhnqrsewlkksvlslanvgffssdrcieeysdtiwnvepv---------
phsg_ecoli yelq-eewtakamlnianmgyfssdrtikeyadhiwhidpvr--------
phsg_haein ykqr-dqwiestiqnivnmgffssdrtikeyaeriwkvepvq--------

gpb        ki
ahpA       --
ygpA       --
phsg_ecoli --
phsg_haein --



