
SAGA FORMAT
alignement  kinase_ref3.t_coffee_aln10 nseq=25 len=337
T_COFFEE ALIGNMENT
CPU TIME:3665860



1cdkA      -----qferiktlgtgsfgrvmlvkhke-----------------tgnhf
dc1        ------yitravlgngsfgtvmlvreks-----------------gknyy
kcc1_yeast -----kyvfgktlgagtfgvvrqaknte-----------------tgedv
kcc2_yeast -----nyifgrtlgagsfgvvrqarkls-----------------tnedv
psk_h1     ------ydikaligrgsfsrvvrvehra-----------------trqpy
bark       ------fsvhriigrggfgevygcrkad-----------------tgkmy
ks62_human -----qfellkvlgqgsfgkvflvkkisg---------sd-----arqly
pkc_beta   ------fnflmvlgkgsfgkvmlserkg-----------------tdely
kpc1_yeast -----nfvllkvlgkgnfgkvilskskn-----------------tdrlc
ypk2_yeast -----dfdllkvigkgsfgkvmqvrkkd-----------------tqkiy
krac_dicdi -----dfellnlvgkgsfgkviqvrkkd-----------------tgevy
1csn       -----hykvgrrigegsfgvifegtnlln-----------------nqqv
rag8_klula -ivglhykigkkigegsfgvlfegvnmin-----------------nvpv
ck13_yeast hivgihyavgpkigegsfgvifegenilhscqaqtgskrdssiimanepv
kc1e_human --vgnkyrlgrkigsgsfgdiylganias-----------------geev
hr25_yeast --vgrkfrigrkigsgsfgdiyhgtnlis-----------------geev
hhp2_schpo --ignkyrigrkigsgsfgqiylglntvn-----------------geqv
kc1a_drome -ivggkyrvirkigsgsfgdiylgmsiqs-----------------geev
kc1b_bovin -lvggryklvreigfgsfghvylaidltn-----------------heqv
ck1beta    ------yklvreigfgsfghvylaidltn-----------------heqv
hrr25      ------frigrkigsgsfgdiyhgtnlis-----------------geev
dckii      ------yqlvrklgrgkysevfeainitt-----------------tekc
cka1       ------yeienkvgrgkysevfqgvklds-----------------kvki
cka2       ------yeiinkigrgkysevfsgrcivn-----------------nqkc
erk1       ------ytqlqyigegaygmvssaydhvr-----------------ktrv

1cdkA      amkildkqkvvklk-qiehtlnekrilq---avnfpflvkleysfkdns-
dc1        aakmmskedlvrlk-qvahvhnekhvln---aarfpfliylvdstkcfd-
kcc1_yeast avkilikkalkgnkvqlealydeldilq---rlhhpnivafkdwfeskd-
kcc2_yeast aikillkkalqgnnvqlqmlyeelsilq---klshpnivsfkdwfeskd-
psk_h1     aikmietkyr-egr-evce--selrvlr---rvrhaniiqlvevfetqe-
bark       amkcldkkrikmkq-getlalnerimlslvstgdcpfivcmsyafhtpd-
ks62_human amkvlkkatlkvrd-rv-rtkmerdilv---evnhpfivklhyafqteg-
pkc_beta   avkilkkdvviqdd-dvectmvekrvla--lpgkppfltqlhscfqtmd-
kpc1_yeast aikvlkkdniiqnh-diesaraekkvfllatktkhpfltnlycsfqten-
ypk2_yeast alkalrkayivskc-evthtlaertvla---rvdcpfivplkfsfqspe-
krac_dicdi amkvlskkhivehn-evehtlsernilq---kinhpflvnlnysfqted-
1csn       aikfeprrs--da-pqlrdeyrtyklla--gctgipnvy---yfgqegl-
rag8_klula aikfeprkt--da-pqlkdeyrtykils--gsegipqay---yfgqegl-
ck13_yeast aikfeprhs--da-pqlrdefrayriln--gcvgiphay---yfgqegm-
kc1e_human aiklecvkt--kh-pqlhieskfykmmq--ggvgipsik---wcgaegd-
hr25_yeast aiklesirs--rh-pqldyesrvyryls--ggvgipfir---wfgrege-
hhp2_schpo avkleplka--rh-hqleyefrvynilk--gnigiptir---wfgvtns-
kc1a_drome aikmesaha--rh-pqllyeaklyrils--ggvgfprir---hhgkekn-
kc1b_bovin avklesent--rq-prllhekelynflq--ggvgipqir---wygqetd-
ck1beta    avklesent--rq-prllhekelynflq--ggvgipqir---wygqetd-
hrr25      aiklesirs--rh-pqldyesrvyryls--ggvgipfir---wfgrege-
dckii      vvkilkpvkkk----kikreikilenlr--g---gtniitllavvkdpv-
cka1       vikmlkpvkkk----kikreikiltdls--g---haniihlfdiikdpi-
cka2       vikvlkpvkmk----kiyrelkiltnlt--g---gpnvvglydivqdad-
erk1       aikkispfehqtycqrtlreiqillgfr------henvigirdilraptl

1cdkA      -nly--mvmeyvpggemfshl-r-rigrfsepharfyaaqivltfeylhs
dc1        -yly--lilplvnggelesyh-r-rvrkfnekharfyaaqvalaleymhk
kcc1_yeast -kfy--iitqlakggelfdri-l-kkgkfteedavrilveilsavkymhs
kcc2_yeast -kfy--ivtqlatggelfdri-l-srgkftevdaveiivqilgaveymhs
psk_h1     -rvy--mvmelatggelfdri-i-akgsfterdatrvlqmvldgvrylha
bark       -kls--fildlmnggdlhyhl-s-qhgvfseadmrfyaaeiilglehmhn
ks62_human -kly--lildflrggdlftrl-s-kevmfteedvkfylaelalaldhlhs
pkc_beta   -rly--fmmeyvnggdlmyhi-q-qvgrfkephavfyaaeiaiglfflqs
kpc1_yeast -riy--famefigggdlmwhv-q-n-qrlsvrrakfyaaevllalkyfhd
ypk2_yeast -kly--lvlafinggelfyhl-q-hegrfslarsrfyiaellcaldslhk
krac_dicdi -kly--fildyvnggelfyhl-q-kdkkftedrvryygaeivlalehlhl
1csn       -hnv--lvidll-gpsledlldl-cgrkfsvktvamaakqmlarvqsihe
rag8_klula -hni--lvidll-gpsledlfdw-cgrrfsiktvvhvaiqmitlieelhd
ck13_yeast -hni--liidll-gpsledlfew-cgrkfsvkttcmvakqmidrvraihd
kc1e_human -ynv--mvmell-gpsledlfnf-csrkfslktvllladqmisrieyihs
hr25_yeast -yna--mvidll-gpsledlfny-chrrfsfktvimlalqmfcriqyihg
hhp2_schpo -yna--mvmdll-gpsledlfcy-cgrkftlktvllladqlisrieyvhs
kc1a_drome -fnt--lvmdll-gpsledlfnf-ctrhftiktvlmlvdqmigrleyihl
kc1b_bovin -ynv--lvmdll-gpsledlfnf-csrrfsmktvlmladqmisrieyvhs
ck1beta    -ynv--lvmdll-gpsledlfnf-csrrfsmktvlmladqmisrieyvhs
hrr25      -yna--mvidll-gpsledlfny-chrrfsfktvimlalqmfcriqyihg
dckii      -srtpalifehvnntd----fkql-yqtltdyeiryylfellkaldychs
cka1       -sktpalvfeyvdnvd----fril-ypkltdleirfymfellkaldychs
cka2       -skipalifeeiknvd----frtl-yptfklpdiqyyftqllialdychs
erk1       eamrdvyivqdlmetdl---ykllksqqlsndhicyflyqilrglkyihs

1cdkA      ldliyrdlkpenllidqqg---------------------yiqvtdfgfa
dc1        mhlmyrdlkpenilldqrg---------------------yikitdfget
kcc1_yeast qnivhrdlkpenllyidks----de--------------splvvadfgia
kcc2_yeast knvvhrdlkpenvlyvdks----en--------------splviadfgia
psk_h1     lgithrdlkpenllyyhpg----td--------------skiiitdfgla
bark       rfvvyrdlkpanilldehg---------------------hvrisdlgla
ks62_human lgiiyrdlkpenilldeeg---------------------hikltdfgls
pkc_beta   kgiiyrdlkldnvmldseg---------------------hikiadfgmc
kpc1_yeast ngviyrdlklenilltpeg---------------------hikiadyglc
ypk2_yeast ldviyrdlkpenilldyqg---------------------hialcdfglc
krac_dicdi sgviyrdlkpenllltneg---------------------hicmtdfglc
1csn       kslvyrdikpdnfligrpn--skna--------------nmiyvvdfgmv
rag8_klula hdliyrdikpdnfligrpn--qpda--------------nmvhlidfgma
ck13_yeast hdliyrdikpdnflisqyqrispegkvikscasssnndpnliymvdfgma
kc1e_human knfihrdvkpdnflmgl----gkkg--------------nlvyiidfgla
hr25_yeast rsfihrdikpdnflmgv----grrg--------------stvhvidfgls
hhp2_schpo ksflhrdikpdnflmk------khs--------------nvvtmidfgla
kc1a_drome kcfihrdikpdnflmgi----grhc--------------nklflidfgla
kc1b_bovin rnlihrdikpdnflmgt----gpqw--------------kklflvdfgla
ck1beta    rnlihrdikpdnflmgt----gpqw--------------kklflvdfgla
hrr25      rsfihrdikpdnflmgv----grrg--------------stvhvidfgls
dckii      mgimhrdvkphnvmidhen--------------------rklrlidwgla
cka1       mgimhrdvkphnvmidhkn--------------------kklrlidwgla
cka2       mgimhrdvkpqnvmidpte--------------------rklrlidwgla
erk1       anvlhrdlkpsnllinttc---------------------dlkicdfgla

1cdkA      krvk----------grtwtlcgtpeylapeiil-skgynkavdwwalgvl
dc1        krvd----------grtstlcgtpeylapeivq-lrpynksvdwwafgil
kcc1_yeast krlks---d----eellykpagslgyvapevlt-qdghgkpcdiwsigvi
kcc2_yeast kqlkg---e----edliykaagslgyvapevlt-qdghgkpcdiwsigvi
psk_h1     sarkkg--d----dclmkttcgtpeyiapevlv-rkpytnsvdmwalgvi
bark       cdfs---------kkkphasvgthgymapevlqkgvaydssadwfslgcm
ks62_human kesid---h----ekkaysfcgtveymapevvn-rrghtqsadwwsfgvl
pkc_beta   keniw---d----gvttktfcgtpdyiapeiia-yqpygksvdwwafgvl
kpc1_yeast kdemw---y----gnrtstfcgtpefmapeilk-eqeytkavdwwafgvl
ypk2_yeast klnmk---d----ndktdtfcgtpeylapeill-gqgytktvdwwtlgil
krac_dicdi kegllt--p----tdktgtfcgtpeylapevlq-gngygkqvdwwsfgsl
1csn       kfyrdpvtkqhipyrekknlsgtarymsinthl-greqsrrddlealghv
rag8_klula klyrdpktkqhipyrekkslsgtarymsinthl-greqsrrddmealghv
ck13_yeast kqyrdprtkqhipyrerkslsgtarymsinthf-greqsrrddleslghv
kc1e_human kkyrdarthqhipyrenknltgtaryasinthl-gieqsrrddleslgyv
hr25_yeast kkyrdfnthrhipyrenksltgtaryasvnthl-gieqsrrddleslgyv
hhp2_schpo kkyrdfkthvhipyrdnknltgtaryasinthi-gieqsrrddleslgyv
kc1a_drome kkfrdphtrhhivyredknltgtaryasinahl-gieqsrrddmeslgyv
kc1b_bovin kkyrdnrtgqhiphrsgksfigtpfcasisahl-gieqsrrddmesigyv
ck1beta    kkyrdnrtgqhiphrsgksfigtpfcasisahl-gieqsrrddmesigyv
hrr25      kkyrdfnthrhipyrenksltgtaryasvnthl-gieqsrrddleslgyv
dckii      efyhpgq--e------ynvrvasryfkgpellvdyqmydysldmwslgcm
cka1       efyhvnm--e------ynvrvasrffkgpellvdyrmydysldlwsfgtm
cka2       efyhpgv--d------ynvrvasryhkgpellvnlnqydysldlwsvgcm
erk1       riadpeh--dhtg--flteyvatrwyrapeimlnskgytksidiwsvgci

1cdkA      iyemaagyppff-adqp---iqiyekivsgkvr-f----p--sh-fssdl
dc1        vyefvagrspfa-ihnr-dvilmyskicicdyk-m----p--sy-ftsql
kcc1_yeast tytllcgysafr-aerv---qdfldecttgeyp-vkfhrpywds-vsnka
kcc2_yeast tytllcgyspfi-aesv---egfmeectasryp-vtfhmpywdn-isidv
psk_h1     ayillsgtmpfe-ddnr---trlyrqilrgkys-ysg-ep-wps-vsnla
bark       lfkllrghspfr-qhktkdkheidrmtltmave-l----p--ds-fspel
ks62_human mfemltgtlpfq-gkdr---ketmtmilkaklg-m----p--qf-lspea
pkc_beta   lyemlagqapfe-gede---delfqsimehnva-y----p--ks-mskea
kpc1_yeast lyqmllcqspfs-gdde---devfnailtdepl-y----p--id-magei
ypk2_yeast lyemmtglppyy-denv---pvmykkilqqpll-f----p--dg-fdpaa
krac_dicdi lyemltglppfy-nqdv---qemyrkimmekls-f----p--hf-ispda
1csn       fmyflrgslpwq-glkaatnkqkyerigekkqs-t----pl-re-lcagf
rag8_klula ffyflrgqlpwq-glkaannklkyekigekkrs-t----nv-yd-lsqgl
ck13_yeast ffyflrgslpwq-glkapnnklkyekigmtkqkln----pd-dlllnnai
kc1e_human lmyfnlgslpwq-glkaatkrqkyerisekkms-t----pi-ev-lckgy
hr25_yeast liyfckgslpwq-glkattkkqkydrimekkln-v----sv-et-lcsgl
hhp2_schpo llyfcrgslpwq-glqadtkeqkyqrirdtkig-t----pl-ev-lckgl
kc1a_drome mmyfnrgvlpwq-gmkantkqqkyekisekkms-t----pi-ev-lckgs
kc1b_bovin lmyfnrgslpwq-glkaatlkqkcekisemkmt-t----pv-dv-lckgf
ck1beta    lmyfnrgslpwq-glkaatlkqkcekisemkmt-t----pv-dv-lckgf
hrr25      liyfckgslpwq-glkattkkqkydrimekkln-v----sv-et-lcsgl
dckii      lasmifrkepffhghdn---ydqlvriakv-lg-t----e--------el
cka1       lasmifkrepffhgtsn---tdqlvkivkv-lg-t----s--------df
cka2       laaivfkkepffkgssn---pdqlvkiatv-lg-t----k--------el
erk1       laemlsnrpif-pgkhy---ldqlnhilgi-lg-s----p--------sq

1cdkA      kdllrnllqvdltkrfgnlkdgvndiknhkwfattd-
dc1        rslveslmqvdtskrlgnsndgssdvkshpw------
kcc1_yeast kqfilkalnldpskrp----taa-elledpwiict--
kcc2_yeast krfilkalrlnpadrp----tat-ellddpwitsk--
psk_h1     kdfidrlltvdpgarmta----l-qalrhpwv-----
bark       rsllegllqrdvnrrlgclgrga-evkespff-----
ks62_human qsllrmlfkrnpanrlgagpdgveeikrhsffsti--
pkc_beta   vaickglmtkhpgkrlgcgpegerdikehaff-----
kpc1_yeast vqifqglltkdpekrlgagprdadevmeepffrni--
ypk2_yeast kdlligllsrdpsrrlgvn--gtdeirnhpffkdi--
krac_dicdi rslleqllerdpekrla-d---pnlikrhpffrsi--
1csn       peefykymhyarnlafdatpd---ydylqglfskvle
rag8_klula pvqfgryleivrnlgfeetpd---yegyrklllsvld
ck13_yeast pyqfatylkyarslkfdedpd---ydylislmddalr
kc1e_human psefstylnfcrslrfddkpd---ysylrqlfrnlfh
hr25_yeast plefqeymaycknlkfdekpd---ylflarlfkdlsi
hhp2_schpo peefitymcytrqlsftekpn---yaylrklfrdlli
kc1a_drome paefsmylnycrslrfeeqpd---ymylrqlfrilfr
kc1b_bovin piefamylkyclrlsfeeapd---yrylrqlfrllfr
ck1beta    piefamylkyclrlsfeeapd---yrylrqlfrllfr
hrr25      plefqeymaycknlkfdekpd---ylflarlfkdlsi
dckii      yayldkynidldp-rfhdi---lqrhsrkrwer--fv
cka1       ekyllkyeitlpr-efydm---dq-ysrkpwhr--fi
cka2       lgylgkyglhlps-eydni---mrdftkkswth--fi
erk1       e-d---lnc------iinm------kar-nylq--sl



