
SAGA FORMAT
alignement  2pia_ref3.t_coffee_aln10 nseq=20 len=353
T_COFFEE ALIGNMENT
CPU TIME:1521680



2pia       -p---qe-dgflrlkiaskekiardi--wsfeltdpqgaplppfeaganl
vanb_pses9 -m---------ldlmirglrleapgi--lglelvatdgsplptfeagahl
POBB_PSEPS -msaaat-mapvslrihaiaygaddv--llfdlrapardglapfdagahi
YEAX_ECOLI -m---sd-yqmfevqvsqveplteqv--krftlvatdgkplpaftggshv
1fnc       tvnkfkpktpyvgrcllntkitgddapgetwhmvfsheg-eipyregqsv
fenr_cyapa plnlfrpanpyigkciynerivgegapgetkhiiftheg-kvpylegqsi
fenr_spisp pvniykpknpyigkclsneelvreggtgtvrhlifdisggdlrylegqsi
fens_orysa -lntykpkepytativsverivgpkapgetchividhgg-nvpywegqsy
fenr_anaso pvnlyrpnapfigkvisneplvkeggigivqhikfdltggnlkyiegqsi
fenr_chlre plntysnkapfkakvrsvekitgpkatgetchiiieteg-kipfwegqsy
1ndh       paitlenpdikyplrlidkevvnhdt--rrfrfalpspehilglpvgqhi
nia2_brana --ialvnprekvpvtliektsishdv--rrfrfalpsedqqlglpvgkhi
nia_phyin  ----------kvpivlisrevvshda--rifkfalpakdlrlglpignhv
nia_emeni  prptfltpkawtkatltkktsvssdt--hiftlslehpsqalglptgqhl
nia_lepmc  lrptfldsrtwskallssktkvswdt--rifrfkldhasqtlglptgqhl
nia_aspng  pratflqskswtkatlvkrtdvswdt--riftfqlqhdkqtlglpigqhl
nia_fusox  ---------------ldkktsispdt--kifsfklnheaqkiglptgqhl
nia_neucr  ---------------ltfkesvspdt--kifhfalshpaqsiglpvgqhl
nia_ustma  ----fldpkkwratrlgeqanhspda--rifrfalgsedqelglpwpaal
nia_beaba  ----flqpkywskailetktdvssds--kifsfrldhaaqsiglptgqhl

2pia       tvavp--ng---------srrtyslcnd-sq----ernr--yvia--vkr
vanb_pses9 dlhlp--gg---------lvrpyslcna-pg----ethr--ycla--vll
POBB_PSEPS dlrlp--rg---------itrsysllnd-pa----erhr--yvig--vkr
YEAX_ECOLI ivqms--dg--dn----qysnaysllss-ph----dtsc--yqia--vrl
1fnc       gvipdgedkn--gk-p-hklrlysiass-algdfgdaksvslcvkrliyt
fenr_cyapa giippgtdkd--gk-p-hklrlysiast-rhgdfgddktvslsvkrleyt
fenr_spisp giippgtdnn--gk-p-hklrlysiast-rhgdhvddktvslcvrqleyk
fens_orysa giippgenpkkpga-p-hnvrlysiast-rygdsfdgrttslcvrravyy
fenr_anaso giippgvdkn--gk-p-eklrlysiast-rhgddvddktislcvrqleyk
fenr_chlre gvippgtkinskgk-evptarlysiass-rygddgdgqtaslcvrravyv
1ndh       ylsar------idg-n-lvirpytpvss-dd----dkgfvdlvik--vyf
nia2_brana flcan------ind-k-lclraytptst-vd----avghidlvvk--vyf
nia_phyin  flyak------ing-k-tavraytpiss-en-de-drgfvsflik--vyf
nia_emeni  mlktp--dpkssss-g-siirsytpisp-sd----qlgmvdilik--iya
nia_lepmc  mirlr--dp--vtr-e-aiirsytpisq-is----eqgfcdvlik--iya
nia_aspng  mikva--dp--tsk-e-aiirsytpisd-tn----qegtmdllvk--iyf
nia_fusox  mmrlr--dp--atr-e-aiirsytpysd-gs----dcgrldilik--iyy
nia_neucr  mmrlp--dp--akpte-siiraytpisdgtl----ergtlrvlvk--iyy
nia_ustma  rlsle--krrtgea-e-mvqraytpysg-nt----qrgfldilik--vyf
nia_beaba  lvrlr--dp--atr-e-aviraytplse-th----akgqldilik--iyr

2pia       --d------sn--gr-ggsis-fiddtsegd-----avevslprnefpld
vanb_pses9 --d------pa--sr-ggsra-vheqlrvgq-----hlttsaprnlfplv
POBB_PSEPS --e------pe--sr-ggsaw-lhadarvga-----lievdgpsnhfald
YEAX_ECOLI --e------en--sr-ggsrf-lhqqvkvgd-----rltistpnnlfali
1fnc       n-dage----t----ikgvcsnflcdlkpga-----evkltgpvgkemlm
fenr_cyapa d-angn----l----vkgvcsnylcdlkpgd-----evmitgpvgttmlm
fenr_spisp hpetge----t----vygvcstylcnleaga-----dvaitgpvgkemll
fens_orysa dpetgk-edps----kngvcsnflcnskpgd-----kvkvtgpsgkimll
fenr_anaso hpesge----t----vygvcstylthiepgs-----evkitgpvgkemll
fenr_chlre dpetgk-edpa----kkglcsnflcdatpgt-----eismtgptgkvlll
1ndh       k-dt----hpk--fpaggkmsqylesmkigd-----tiefrgpngllvyq
nia2_brana k-dv----hpr--fpngglmsqhldslpigs-----vlnikgplghieyl
nia_phyin  a-gd----npv--hpegglfsqyldglhlgq-----qiqikgplghftyy
nia_emeni  --et-----ps--ip-ggkmttaldtlplgs-----vieckgptgrfeyl
nia_lepmc  --da-----pg--re-ggkmtkaldsipcgh-----wvdmkgpigkfeyl
nia_aspng  --dt-----pt--vk-ggkmtmaleklalgs-----eidckgptgrfeyl
nia_fusox  --dt-----pq--rk-ggvmtqaldalpigh-----wvdfkgptgkfvyh
nia_neucr  --as-----ptedik-ggqmtqaldalalgk-----avefkgpvgkfvyq
nia_ustma  psdaaatsapa--fe-ggkmtmllekidvsspsddltielkgplgsftyl
nia_beaba  --dv-----pg--qp-ggkmtqaldsiplgh-----fvdikgpvgkfeyl

2pia       k------------r------aksfilvaggigitpmlsmarqlraeglr-
vanb_pses9 a------------e------ssrsllfaggigitpilamaqvlaargd--
POBB_PSEPS e------------s------aphavfiaggigitplwsmvqrlehlgt--
YEAX_ECOLI p------------s------arkhlfiaggigitpflshmaelqhsdv--
1fnc       pk----------dp------natiimlgtgtgiapfrsflwkmffekh--
fenr_cyapa pe----------dq------satiimlatgtgiapfrsflrrmfeeth--
fenr_spisp pe----------de------datiimmatgtgiapfraflwrifkeqh--
fens_orysa pe---------edp------nathimiatgtgvapfrgylrrmfmedv--
fenr_anaso pd----------dp------eanvimlatgtgiapmrtylwrmfkdaera
fenr_chlre pa----------da------naplicvatgtgiapfrsfwrrcfienv--
1ndh       gkgkfair-pdkksspviktvksvgmiaggtgitpmlqviraimkdpd--
nia2_brana gkgnfmvt-gkpkf------akklamlaggpgitpiyqviqsilsdpe--
nia_phyin  gdgnfsle-ttnfh------aykfgfvaggtgitpvyqvmrailedak--
nia_emeni  drgrvlis-gkerf------vksfvmicggtgitpvfqvlravmqdeq--
nia_lepmc  gkgvcsin-gnerr------vrsmkmicggsgitpiyqvlrailqdsa--
nia_aspng  gngkilvs-gkerh------vssfkmicggtgitpifqvlravmqdkq--
nia_fusox  gnglctin-ekerr------vrrfimvcggsgitpirqvlravidnpk--
nia_neucr  grgvcsvn-grerk------vkrfvmvcggsgvtpiyqvaeavavddq--
nia_ustma  gqqqirwkpasacs------lrklamiaggsgitpiwstlkaiadevlda
nia_beaba  gkghctvs-gtsrh------vrrfvmicagsgvtpifqvlravtsdaq--

2pia       ---------sfr--lyyltrdpegtaffdel---ts-dew---r-sdvki
vanb_pses9 ---------tfe--lhycvrsrrlaafidwl---ea-stf---a-ahvhl
POBB_PSEPS ---------pwt--lhyrarsrrgaalldel---ag-h-----g-drvhl
YEAX_ECOLI ---------dwq--lhycsrnpescafrdel---vq-hpq---a-ekvhl
1fnc       --ddy-kf-nglawlflgvptsssllykeefekmke-ka--p-dnfrldf
fenr_cyapa --ady-kf-nglawlflgvptsstllyreelekmqk-an--p-nnfrldy
fenr_spisp --edy-kf-kglawlffgipyspnilyqqeleelqe-ef--p-enfrltl
fens_orysa --pky-rf-gglawlflgvantdsllydeeftsylk-qy--p-dnfrydk
fenr_anaso anpey-qf-kgfswlvfgvpttpnilykeeleeiqq-ky--p-dnfrlty
fenr_chlre --psy-kf-tglfwlfmgvgnsdaklydeelqaiak-ay--p-gqfrldy
1ndh       --------dhtvchllfanqtekdillrpeleelrn-eh--s-arfklwy
nia2_brana --------detemfvvyanrteddilvreelegwan-kh--k-drlkvwy
nia_phyin  --------dqtkvaliycvrsqrdlllrkeletlqk-lr--p-gqcrify
nia_emeni  --------detkcvmldgnrleedillkneldefea-lagkk-ekckivh
nia_lepmc  --------dsthctvlngnrleedilcredldrfae-en--g-erctlvh
nia_aspng  --------dptscvvldgnrqeedilcradldayea-ld--s-kkckvvh
nia_fusox  --------dttpclvfngnrsvndilcmeeleelea-an--p-srcrvvn
nia_neucr  --------dgteclvldgnrvegdilmkseldelverak--pmgrcrvky
nia_ustma  snpsspaldpiqiwivygnrteqdilireeldals-rlk----gnlkvwh
nia_beaba  --------dgteclvldgnrcekdilcreeldamva-ra--p-arttllh

2pia       hhdhg------d--------ptka-fd-fwsvf---ek----------s-
vanb_pses9 haddg---------------ptp--fd-atall---rd----------a-
POBB_PSEPS sfsde---------------gaps-ld-laaiv---aa----------a-
YEAX_ECOLI hhsst---------------gtr--le-larll---ad----------i-
1fnc       avsreq----------tnekgekmyiq-trmaqyav-e----l--wemlk
fenr_cyapa aisreq----------tdskgekmyiq-nriaeyan-e----f--wnmiq
fenr_spisp aisreq----------qnpeggkmyiq-drikenad-q----l--weliq
fens_orysa alsreq----------knknagkmyvq-dkieeysd-e----i--fklld
fenr_anaso aisreq----------knpqggrmyiq-drvaehad-e----l--wqlik
fenr_chlre alsreq----------nnrkggkmyiq-dkveeyad-e----i--fdlld
1ndh       tvdrap----------eawdysqgfvn-eemir---dh----lpp--p--
nia2_brana vveiak----------egwnystgfit-epvlr---eh----vpe--gl-
nia_phyin  tlsdmelldrndpiv-rgwaygksrln-famvk---ni----igs-----
nia_emeni  tltkgs----------eswtgrrgrid-eelir---qh----agt----p
nia_lepmc  tltqaa----------egwtgrrgrig-eellk---ef----cg----t-
nia_aspng  tltkap----------dswtgrrgris-edllk---eh----a-i----p
nia_fusox  alsnpp----------pewnglkgfvn-qalvp---ey----mdlpkasg
nia_neucr  tlsrpg----------aeweglrgrld-ktmle---re----vg--egdl
nia_ustma  vlsnct------peneanwsmgrgislpmslgapatnhrqscfg---gde
nia_beaba  klsrpd----------aswcglrgrmd-keyle---eh----iggfrks-

2pia       kpaqhvyccgpqalmd-tvrdmt--gh------wps-gt--vhf-esfga
vanb_pses9 -gdahlyvcgpggfme-hvlgcartag------wde-tr--lhr-eyfaa
POBB_PSEPS pegahfyccgpvpmle-afeaacvgld------pa---r--vhl-eyfaa
YEAX_ECOLI epgthvytcgpealie-avrseaarld------iaa-dt--lhf-eqfai
1fnc       kdntyvymcglkgmek-giddimvslaaaegidwie-ykrqlkkaeqwnv
fenr_cyapa kpntfvymcglrgmed-giqqcmediakangttwda-vvkglkkekrwhv
fenr_spisp kpnthtyicglkgmeg-gidegmsaaagkfdvdwsd-yqkelkkkhrwhv
fens_orysa g-gahiyfcglkgmmp-giqdtlkkvaeqrgesweq-klsqlkknkqwhv
fenr_anaso nqkthtyicglrgmee-gidaalsaaaakegvtwsd-yqkdlkkagrwhv
fenr_chlre n-gahmyfcglkgmmp-giqdmlervakekglnyee-wveglkhknqwhv
1ndh       eeeplvlmcgpppmiqyaclpnlervg------hpkerc--faf------
nia2_brana egeslalacgpppmiqfalqpnlekmg------ynvked--lli------
nia_phyin  daed-vcmcgpegmieyackpallkln------ydlk-------------
nia_emeni  dretmvlvcgpeamek-askkillslg------wke-en--lhy------
nia_lepmc  eedglvlvcgpegler-svkgllsgma------wrd-dd--vif------
nia_aspng  dgksmvlicgpeamek-sarkilleqg------was-d---lhf------
nia_fusox  egdelllvcgpppmvk-aveasflgmg------fkd-d---fvf------
nia_neucr  rgetmvllcgpegmqn-mvrevlkgmg------wkd-ed--vlv------
nia_ustma  ledtlalvcgpppmek-avsdglnelg------wdl-qr--cvv------
nia_beaba  dgremvlvcgpaalee-tvrsvlvema------wke-d---mlf------

2pia       ---
vanb_pses9 ---
POBB_PSEPS ---
YEAX_ECOLI ---
1fnc       evy
fenr_cyapa et-
fenr_spisp et-
fens_orysa ev-
fenr_anaso et-
fenr_chlre ev-
1ndh       ---
nia2_brana ---
nia_phyin  ---
nia_emeni  ---
nia_lepmc  ---
nia_aspng  ---
nia_fusox  ---
nia_neucr  ---
nia_ustma  ---
nia_beaba  ---



