
SAGA FORMAT
alignement  1lvl_ref1.t_coffee_aln10 nseq=4 len=508
T_COFFEE ALIGNMENT
CPU TIME:27360



1lvl  qqtiqttlliigggpggyvaai--ragqlgiptvlvegqalggtcln---
3grs  --vasydylvigggsgglasar--raaelgaraavveshklggtcvn---
1nhp  -----mkvivlgsshggyeave---ellnlhpdaeiqwyekg---df---
1fcdA ---agrkvvvvgggtggataakyikladpsievtliepntdyytcylsne

1lvl  -ig-cipskalih--vaeqfhqasrftepsplgisvasp--rldigqsva
3grs  -vg-cvpkkvmwn--ta--vh-sefmhdhadygfpsceg--kfnwrvike
1nhp  -i-------sfls--agmqlylegkvkd-------vnsv--rymtgekme
1fcdA viggdrklesikhgydglrah-giqvvhdsatgidpdkklvktaggaefg

1lvl  wkdgivdr----lttgvaallkkhgvkvvhg-wakvl-dgk-qvevdgq-
3grs  krdayvsr----lnaiyqnnltkshieiirg-haaftsdpkptievsgk-
1nhp  sr-gvnvf----snteitaiqpk--------ehqvtvkd-----lvsge-
1fcdA ydrcvvapgieliydkiegyseeaaaklpha-wk----age-qtail--r

1lvl  ---riqceh-lllatg--sssvelpmlplggpv--isste------alap
3grs  ---kytaph-iliatggmpstphesqipgaslg--itsdg------ffql
1nhp  ---ervenydkliispg--avpfeldipgkdldniylmrgrqwaiklkqk
1fcdA kqledmadggtvviappa--apfrcp-pg-------p-ye------rasq

1lvl  ka--lpq--hlvvvgggyiglelgiayrklgaqvsvvearerilpty-ds
3grs  ee--lpg--rsvivgagyiavemagilsalgsktslmirhdkvlrsf-ds
1nhp  tv--dpevnnvvvigsgyigieaaeafakagkkvtvidildrplgvyldk
1fcdA vayylka--hkpms--kviildssqtfskq-sqfs--kgwerlyg-f-gt

1lvl  eltapvaeslkklgialh-------lghsvegyengcllandgkg--gql
3grs  mistncteelenagvevlkfsqvkevkktlsglevsmvtavpgrlpvmtm
1nhp  eftdvlteemeannitia-------tgetverye-gdgrvqkvvt--dkn
1fcdA en-am---------iew-------hp-----gpdsavvkvdggemmveta

1lvl  rleadrvlvavgrrprtkgfnlecldlkmng-aaiaid--ercqtsmhn-
3grs  ipdvdcllwaigrvpntkdlslnklgiqtddkghiivd--efqntnvkg-
1nhp  aydadlvvvavgvrpntawlkg-tlelhpng--liktd--eymrtsepd-
1fcdA fgd-efkadvinlippqragkiaqiagltndagwcpvdiktf-essihkg

1lvl  vwaigdva-gepm--lahramaqgemvaeiiag--karrfepaaiaavcf
3grs  iyavgdvc-gkal--ltpvaiaagrklahrlfeykedskldynniptvvf
1nhp  vfavgdat--lik--ynpadtevn--ialatnarkq-grfavknleepvk
1fcdA ihvigdasianpmpksgysansqgkvaaaavvv--llkgeepg-------

1lvl  tdpev-vvvgkt-peqasqq-gldciv-------aqfp-faang-ramsl
3grs  shppi-gtvglt-edeaihkygienvk-------tystsftpmy-havtk
1nhp  pfpgvqgssglavfdykfastginevmaqklgketkavtvvedylmdfnp
1fcdA -----t-------psylntcysil-ap--aygis-----vaaiy-rpnad

1lvl  esksgfvrvvarrdnhlilgwqavg-vavselstafaqslemgacledva
3grs  rktkcvmkmvcankeekvvgihmqg-lgcdemlqgfavavkmgatkadfd
1nhp  dkqkawfklvydpettqilgaqlmskadltaninaislaiqakmtiedla
1fcdA gs---aiesvpdsg--gvtpvdap-dw-vlerevqyayswyn-nivhdtf

1lvl  gt---iha
3grs  nt---vai
1nhp  yadfffqp
1fcdA g-------



