
SAGA FORMAT
alignement  1uky_ref2.t_coffee_aln10 nseq=24 len=260
T_COFFEE ALIGNMENT
CPU TIME:2855340



1uky       pafspd--qvsvifvlggpgagkgtqceklvkdy---sfvh-----lsag
kcy_dicdi  -mek-s--kpnvvfvlggpgsgkgtqcanivrdf---gwvh-----lsag
kad1_pig   --------kskiifvvggpgsgkgtqcekivqky---gyth-----lstg
kad_schma  --------kakvifvlggpgsgkgtqceklvqkf---hfnh-----lssg
kad_miclu  ---------mtrmllmgppgsgkgtqatriadkl---givp-----istg
kad_mycca  ----------mnimllgapgcgkgtqaeqlvnkl---nfiq-----vstg
kad_bacsu  ----------mnlvlmglpgagkgtqgerivedy---giph-----istg
kadc_maize ---------plkvmisgapasgkgtqceliktky---qlah-----isag
kad_giala  rkk-----nlfklvllgapgagkgtqakhlvsky---slkh-----ispg
kad_neime  ----------mkalllgapgagkgtqaqfitaaf---gipq-----istg
kad_mycge  --------qfnkfiilgppgagkgtvckllsktt---klvh-----iasg
kad_lacla  ----------mnllimglpgagkgtqaefivkny---gvnh-----istg
kad_parde  ---------ainiillgppgagkgtqarrlider---glvq-----lstg
kad_borpe  ----------mrlillgppgagkgtqaafltqhy---gipq-----istg
kad2_human paaepeypkgiravllgppgagkgtqaprlaenf---cvch-----latg
kadx_caeel --a-----rgiraifigppgsgkgtqapafaqky---fsch-----latg
kada_orysa -sk-----pdkrvilvgppgcgkgtqsplikdef---clch-----latg
kadh_triva ---------drmvvffgppgvgkgtqakllekef---nlyq-----istg
kad3_rat   -sg-----rllravimgapgsgkgtgssritkhf---elkh-----lssg
kad3_human -as-----kllravilgppgsgkgtvcqriaqnf---glqh-----lssg
kady_caeel ---------myrvllsgaagsgkgtiarmlvrefeplgfny-----faag
1dvrA      -ss-----esirmvligppgagkgtqapnlqerf---haah-----latg
1bif       --------cptlivmvglpargktyiskkltryl---nfigvptrefnvg
1gky       ---------srpivisgpsgtgkstllkklfaey------p-----dsfg

1uky       dllraeqgragsqygelikncikegqivpqeitlallrn-aisdn-vkan
kcy_dicdi  dllrqeq-qsgskdgemiatmikngeivpsivtvkllkn-aidan-qgk-
kad1_pig   dllraev-ssgsargkmlseimekgqlvpletvldmlrd-amvak-vd-t
kad_schma  dllraev-qsgspkgkelkammergelvplevvlallke-aminw-lt-k
kad_miclu  difrhnv-ksmtplgveakryidngdfvpdevtnrmvad-riaqa-da--
kad_mycca  dlmrkei-slnttlglkcqeymnagkyvpdqivnqivnq-flqyn-nd--
kad_bacsu  dmfraam-keetplgleaksyidkgelvpdevtigivke-rlgkd-dc--
kadc_maize dllraei-aagsengkrakefmekgqlvpdeivvnmvke-rlrqp-da-q
kad_giala  nllreem-nrnspitaqikdyvskgqlvpdsiviklien-hiati-gds-
kad_neime  dmlraai-kagtplgleakkiidegglvrddiiigmvke-riaqd-dc--
kad_mycge  dlfreai-knqsvigrkiaaiisqggyvddattnqlvye-yittn-pl--
kad_lacla  dmfraam-knetemgklaksfidkgelvpdevtngivke-rlaqd-di-k
kad_parde  dmlrear-ssgtemgkrvaevmdrgelvtdeiviglire-klgqg-----
kad_borpe  dmlraav-kagtplgleakkvmdagglvsddliiglvrd-rltqp-dc--
kad2_human dmlramv-asgselgkklkatmdagklvsdemvveliek-nletp-lc--
kadx_caeel dllraev-asgsefgkelkatmdagklvsdevvcklieq-klekp-ec--
kada_orysa dmlraav-aaktplgikakeamdkgelvsddlvvgiide-amkkt-sc--
kadh_triva dalraei-rgqtplgkrvkgiiesgglvdddtimdilqa-cmqkn-td--
kad3_rat   dllrqnm-lqgteiavlaksfidqgklipdddmtrlalh-elknl--t--
kad3_human hflreni-kastevgemakqyieksllvpdhvitrlmms-elenr--r--
kady_caeel dfirdhi-argtefgvraqsflnkgehvpdsilngaila-emlka-gp--
1dvrA      dmlrsqi-akgtqlgleakkimdqgglvsddimvnmikd-eltnnpac--
1bif       qyrrdmv-ktyksfefflpd-neeglkirkqcalaalnd-vrkfl-seeg
1gky       --fsvss-ttrtpragevng-kdyn-fvsvdefksmiknnefiew-a--q

1uky       khkflid-gfprkmdqaisfer----diveskfilffdcpe-dimlerll
kcy_dicdi  --nflvd-gfprneennnsweenmk-dfvdtkfvlffdcpe-evmtqrll
kad1_pig   skgflid-gyprevkqgeefer----kigqptlllyvdagp-etmtkrll
kad_schma  i-vislsirypreldqgikfek----evcpclcvinfdvse-evmrkrll
kad_miclu  ehgflld-gyprtkgqvealdamlaeagqslsavvelevpd-eelverll
kad_mycca  k--lifd-gyprtleqakllekmldlynkkidyvfyidvne-qilikrit
kad_bacsu  ergflld-gfprtvaqaealeeileeygkpidyvinievdk-dvlmerlt
kadc_maize engwlld-gyprsysqamaletl-e---irpdtfilldvpd-ellvervv
kad_giala  --nwlld-gfprsesqaaalraspd---lfpthivelkvdq-eavvqrlg
kad_neime  kngflfd-gfprtlaqaeamv----eagvdldavveidvpd-svivdrms
kad_mycge  pngfild-gyprtenqldflnikl-----tidmvfelvvsdlnklitrid
kad_lacla  asgflld-gyprtidqahaldtmleelgikldavvnivvnp-nilvdrls
kad_parde  gkgfifd-gfprtlaqadalqalmaemdqridaviemrvdd-aalvsris
kad_borpe  angylfd-gfprtipqadalk----sagialdyvveievpe-sdiierms
kad2_human kngflld-gfprtvrqaemlddlmekrkekldsviefsipd-sllirrit
kadx_caeel kygfild-gfprtsgqaekldeilerrktpldtvvefniad-dllvrrit
kada_orysa qkgfild-gfprtvvqaqkldemlakqgtkidkvlnfaidd-aileerit
kadh_triva nngyifd-giprtigqvekldallakmgtplthvlylsvni-delrervc
kad3_rat   qcswlld-gfprtlpqaealdrvy-----qidtvinlnvpf-eviklrlt
kad3_human gqhwlld-gfprtlgqaealdkic-----evdlvislnipf-etlkdrls
kady_caeel r--vvld-gyprnmsqlkmveeq-----aplnlivelkvpr-kvlidrls
1dvrA      kngfilv-gfprtipqaekldqmlkeqgtplekaielkvdd-ellvarit
1bif       ghvavfd-atnttrerramifnfgeqngyktffvesicvdp-eviaani-
1gky       fsgn-yy-gs--tvasvkqvs----ksgk--tcil--didm-qg-vksvk

1uky       er--gktsg--------------------------r-sddniesikkrfn
kcy_dicdi  kr--gessg--------------------------r-sddniesikkrfn
kad1_pig   kr--getsg--------------------------r-vddneetikkrle
kad_schma  kr--aetsn--------------------------r-vddneetivkrfr
kad_miclu  kr----------------------aeieg------r-addtqeviehrld
kad_mycca  nrlvcplckasfnletrkpkqeglcdfdnt-klvkr-sddsldkvkirlq
kad_bacsu  grricsvcgttyhlvfnppktpgicdkdgg-elyqr-addneetvskrle
kadc_maize grrldpvtgkiyhlkysppene---eiasr--ltqr-fddteekvklrle
kad_giala  grrfdpitgntyhiiydpppp----diad--rvvvr-tddredvirerfr
kad_neime  grrvhlasgrtyhvtynppkvegkddvtge-dliqr-dddkeetvkkrla
kad_mycge  nrvicnncnsvynllfqkplvenscdqcsa-klvkr-sddnkavvkarme
kad_lacla  gryicrncgatyhkifnptkvegtcdvcgshdlyqr-addvpetvknrld
kad_parde  grfthgncgevygdvtkptkepgkcdvcgstdlrrr-addneeslktrlm
kad_borpe  errvhpasgrsyhvrfnppkaegvddvtge-plvqr-dddreetvrhrln
kad2_human grlihpksgrsyheefnppkepmkdditge-plirr-sddnekalkirlq
kadx_caeel grlfhiasgrsyhlefkppkvpmkddltge-plirr-sddneetlrkrlv
kada_orysa grwihpssgrsyhtkfappktpglddvtge-pliqr-kddtaavlksrle
kadh_triva grlfhpgsgrvyhkvtnppkkpmtdditge-pliir-kddtpevfnqrmn
kad3_rat   arwihpasgrvyniefnppktvgiddltge-pliqr-eddkpetvikrlk
kad3_human rrwihppsgrvynldfnpphvhgiddvtge-plvqq-eddkpeavaarlr
kady_caeel kqlvhpasgraynlevnppkeegkdditge-plfkr-stdqlevarrrle
1dvrA      grlihpasgrsyhkifnppkedmkddvtge-alvqi-sddnadalkkrla
1bif       -----------vqvkl------------gspdyvnrdsdeatedfmrrie
1gky       --aipelnarf--lfiapps---vedlk-k-rlegr-gteteesinkrls

1uky       tfketsmpvieyfet--kskv------vrvrcd-r--svedvykdvqd--
kcy_dicdi  tfnvqtklvidhynk--fdkv------kiipan-r--dvnevyndven--
kad1_pig   tyykatepviafyek--rgiv------rkvnae-g--svddvfsqvct--
kad_schma  tfneltkpviehykq--qnkv------itidas-g--tvdaifdkvnh--
kad_miclu  lyhretesviqeyve--rgiv------arvdgt-g--qiddvterllq--
kad_mycca  tykeqtlplidyfkt--nskf------ieikadnl--saeqvfnqikg--
kad_bacsu  vnmkqtqplldfyse--kgyl------anvngq-q--diqdvyadvkd--
kadc_maize tyyqniesllstyen----ii------vkvqgd-a--tvdavfakide--
kad_giala  vyae-nkdlvdkvfn--hsvv------s-incegq--tidevslqldr--
kad_neime  vyheqtevlvdfyskl-egeha--pkyikvdgt-q--pveavkaevlg--
kad_mycge  lyqqtiqpihtyffn--kqll------vqidcf-l--pleeqlktikq--
kad_lacla  vnikesapiiehyte--lglv------kniege-q--eisqvtddikk--
kad_parde  eyykktspligyyyv--kgnl------npvdgl-a--eidevaaqvak--
kad_borpe  vyqnqtrplvdyysswaqsdaaaapkyrkisgv-g--svdeiksrlsq--
kad2_human ayhtqttplieyyrk--rgih------saidas-q--tpdvvfasila--
kadx_caeel qyhqmtvplvdyykk--hgvh------vavdaa-k--pmtdvkahidq--
kada_orysa afhvqtkpvidyytk--kgiv------anlhae-k--ppkevtvevqk--
kadh_triva qyfgtfqpcidyysk--kgil------qtfpvdgq--pidvvhkklha--
kad3_rat   ayeaqtepvlqyyqk--kgvl------etf--sgt--etnkirphvys--
kad3_human qykdvakpvielyks--rgvl------hqf--sgt--etnkiwpyvyt--
kady_caeel vydktenkvldyykk--qnkc------itmsge----sskavfesvae--
1dvrA      ayhaqtepivdfykk--tgiw------agvdas-q--ppatvwadiln--
1bif       cyensyesldeeqdr--dlsy------ikimdvgqsyvvnrvadhiqsri
1gky       aaqaela-----yae--tgah------dkvivn-d--dldkaykelkd--

1uky       --airdsl--
kcy_dicdi  --lfk-----
kad1_pig   --hl------
kad_schma  --elq-----
kad_miclu  --av------
kad_mycca  --elk-----
kad_bacsu  --ll------
kadc_maize --llgs-i--
kad_giala  --vls-----
kad_neime  --al------
kad_mycge  --fir-----
kad_lacla  --vl------
kad_parde  --vm------
kad_borpe  --alq-----
kad2_human --afska---
kadx_caeel --vfak----
kada_orysa --al------
kadh_triva --alq-----
kad3_rat   --flqmkvpe
kad3_human --lfsnki--
kady_caeel --vmrr----
1dvrA      --klgkn---
1bif       vyylmn-ihv
1gky       --fifaek--



