
SAGA FORMAT
alignement  1thm2_ref5.t_coffee_aln10 nseq=7 len=243
T_COFFEE ALIGNMENT
CPU TIME:48340



1thm       qygpqkiqapqawdia------egsgakiaivdtgvqsnhpdlagkvvg-
1mpt       pwgisrvqapaahnrg-----ltgsgvkvavldtgis-thpdln--irg-
1af4       pygiplikadkvqaqg-----fkganvkvavldtgiqashpdln--vvg-
hly_hal17  qyapqqvnceaawdvt-----ygdpgvtisvvdqgiqydhedlegnmdgs
sube_bacsu qwnlepiqvkqawkag-----ltgknikiavidsgis-phddls--iag-
sepr_thesp twgldridqrtlpldgrytytatgagvhayvvdtgillshqeftgrigk-
prtt_serma qwgleaisaefayara-----ytgkgvtigviddail-shpefagklt-r

1thm       ----gwdfvdndstp---qngnghgthcagiaaavtnnstgiagtapkas
1mpt       ----gasfvpgepst---qdgnghgthvagtiaal-nnsigvlgvapsae
1af4       ----gasfvageayn---tdgnghgthvagtvaal-dnttgvlgvapsvs
hly_hal17  vsnygddfvdndgdpypvsasenhgthvggiaaggtnnatghagis-ncs
sube_bacsu ----gysavsytssy---kddnghgthvagiigak-hngygidgiapeaq
sepr_thesp ----gydaitpggsa---qdcnghgthvagtiggt-t-----ygvakgvt
prtt_serma ldngsynfsydkqdn---msfgthgthvagiaaak-rdgsgmhgvaydad

1thm       ilavrvld---nsgsg---------------twtav---ang-ityaadq
1mpt       lyavkvlg---asgsg---------------svssi---aqg-lewagnn
1af4       lyavkvln---ssgsg---------------sysgi---vsg-iewattn
hly_hal17  llsaralg---dgggg---------------sltdi---ada-iqwsadq
sube_bacsu iyavkald---qngsg---------------dlqsl---lqg-idwsian
sepr_thesp lhpvrvld---cngsg---------------snssv---iag-ldwvtqn
prtt_serma iigtklndygnrngreeliqsaarvinnswgirpdirrdakgdiiwlpng

1thm       g--------ak--vislslggt-------------vgnsglqqavnyawn
1mpt       g--------mh--vanlslgsp-------------spsatleqavnsats
1af4       g--------md--vinmslgga-------------sgstamkqavdnaya
hly_hal17  g--------ad--vinmslggg-------------gfsqtlsnaceyayn
sube_bacsu r--------md--ivnmslgtt-------------sdskilhdavnkaye
sepr_thesp h--------vkpavinmslggg-------------a-staldtavmnain
prtt_serma rpdyvawvktd--vinevmrnksnlewgseqpvptgghsama-tllraak

1thm       kgsvvvaaagnagnt----a---pny--payysnaiavastdq
1mpt       rgvlvvaasgnsgag----s---isy--paryanamavgatdq
1af4       rgvvvvaaagnsgnsg---stntigy--pakydsviavgavds
hly_hal17  qgsllvaaagngygn----s---vsy--paaydtvmavsslde
sube_bacsu qgvllvaasgndgng----kp--vny--paayssvvavsatne
sepr_thesp agvtvvvaagndnrd----a---cfy-sparvtaaitvgatts
prtt_serma hgklivfsagnynnynipeaqkslpyafpevlnnylivtnlsn



