
SAGA FORMAT
alignement  1qpg_ref5.t_coffee_aln10 nseq=15 len=553
T_COFFEE ALIGNMENT
CPU TIME:958838



pgk_klula  slsskltvkd---l-dvtgkrvfirvdfnvpld--g-k--kitsnqriva
pgkh_chlre --avkksvgdlhka-dlegkrvfvradlnvpld--k-atlaitddtrira
pgk_bacme  ---nkktlkd---i-dvkgkrvfcrvdfnvpmk--d-g--kvtdetrira
pgkc_trybb tlnekksine---c-dlkgkkvlirvdfnvpvk--n-g--kitndyrirs
pgka_crifa sipikksvdd---iwpvagkrvlirvdfnvpts--s-g--gidddfrirs
pgkg_tryco nirikktidd---iwpltakrvlvrvdfnvpiq--n-g--hitndyrira
pgk_ecoli  ---svikmtd---l-dlagkrvfiradlnvpvk--d-g--kvtsdarira
pgk_theth  ------tlld---l-dpkgkrvlvrvdynvpvq--d-g--kvqdetrile
pgkc_alceu -------laa---g-glagkrvfiradlnvpqd--aag--aitddtrira
pgk_zymmo  ---------------dvkgkrvlvredlnvpmd--g-d--rvtddtrlra
pgk_corgl  avktlkd---llde-gvdgrhvivrsdfnvpln--d-dr-eitdkgriia
pgk_mycge  nmlnfktlqa---i-dfqnktvvlrsdfnvpmi--n-g--visdserila
pgk_pyrwo  -----frlrd---f-eyynrtvflrvdlnspms--n-g--kiisdarfra
pgk_mycle  ripnlkd---llee-gvsgrcvlvrcdlnvplg--d-dg-aitdlgrvta
pgk_metfe  ------tmdd---f-dysgsrvlvrvdinspvdpht-g--rilddtrmrl

pgk_klula  alptiqyvlekkpkaivlashlgrpn-ge---------------------
pgkh_chlre avptlkylldngak-vlltshlgrpk-gg---------------------
pgk_bacme  aiptiqylveqgak-vilashlgrpk-ge---------------------
pgkc_trybb alptlkkvlteggs-cvlmshlgrpk-gipmaqag-kir-----------
pgka_crifa aiptirrivdqggi-cilishlgrpt-gvdydtahaeqekrqtpvqlpns
pgkg_tryco tiptiqriidqggi-cillshlgrpa-gismttavrdvrrryheahfhdn
pgk_ecoli  slptielalkqgak-vmvtshlgrptege---------------------
pgk_theth  slptlrhllaggas-lvllshlgrpk-g----------------------
pgkc_alceu svpaiaaclqagaa-vmvtshlgrpqega---------------------
pgk_zymmo  aiptvnelaekgak-vlilahfgrpk-gq---------------------
pgk_corgl  slptlkalseggak-vivmahlgrq--ge---------------------
pgk_mycge  gldtikflvkknck-ivllshlsrik-sled-------------------
pgk_pyrwo  vlptikyliesgak-vvvgthqgkpy-s----------------------
pgk_mycle  svptlkalleagak-ivvaahlgrpk-ng---------------------
pgk_metfe  hsktlkelvdenak-vailahqsrpg-k----------------------

pgk_klula  --------------------------------------------------
pgkh_chlre --------------------------------------------------
pgk_bacme  --------------------------------------------------
pgkc_trybb -----------------------------------stg------------
pgka_crifa rgktaffsglrgdakatilawssqrekaatlsnpygsgktavfarlpeee
pgkg_tryco kgktaffsvlppeekikilaqsslreeathimpgvksgktilfarlpede
pgk_ecoli  --------------------------------------------------
pgk_theth  --------------------------------------------------
pgkc_alceu --------------------------------------------------
pgk_zymmo  --------------------------------------------------
pgk_corgl  --------------------------------------------------
pgk_mycge  --------------------------------------------------
pgk_pyrwo  --------------------------------------------------
pgk_mycle  --------------------------------------------------
pgk_metfe  --------------------------------------------------

pgk_klula  -------------------------vndkyslapvadelsrllqk-pvtf
pgkh_chlre -------------------------pedkyrltpvvarlsellgk-pvtk
pgk_bacme  -------------------------vveelrlnavaerlqallgk-dvak
pgkc_trybb ---------------gvp------gfqqkatlkpvakalselllr-pvtf
pgka_crifa krrlllrfmsehkeelfpqlg-sagyekefslepvavklaelldq-hvyf
pgkg_tryco kkqllmqyldekkdnglpqlsvsagyeeqyslrpvavrlaellgq-hvyf
pgk_ecoli  -------------------------yneefsllpvvnylkdklsn-pvrl
pgk_theth  -------------------------pdpkyslapvgealrahlpe-arfa
pgkc_alceu -------------------------pdprhslapvgrrlsellgr-qvpl
pgk_zymmo  -------------------------pnpemslarikdalagvlgr-pvhf
pgk_corgl  -------------------------vnekyslapvaealsdelgq-yval
pgk_mycge  ------------------------klnnkkslkpvaellqqllptvkvqf
pgk_pyrwo  --------------------------eeystteeharilsellnm-hvey
pgk_mycle  -------------------------pdpklslepvaaalgeqlgq-nvql
pgk_metfe  --------------------------rdfttmeehskvlsnildm-pvty

pgk_klula  lhdc----vgeevtnavnnakdgevfllenlrfh----ie-----eegsr
pgkh_chlre vddc----igpevekavgamkngellllencrfy----ke-----ee---
pgk_bacme  adea----fgeevkktidgmsegdvlvlenvrfy----pg-----ee---
pgkc_trybb apdc----l--naadvvskmspgdvvllenvrfy----ke-----eg-sk
pgka_crifa ghdc----lg--aqadiaklrcgevmllenlrfy----tn-----en-ss
pgkg_tryco ahdc----m--dakmelsrlkrgnvmllenvrfy----re-----ed-sk
pgk_ecoli  vkdy----l-----dg-vdvaegelvvlenvrfn----kg-----ek---
pgk_theth  pfpp----gseearreaealrpgevlllenvrfe----pg-----ee---
pgkc_alceu lsgw----t-----eggfqvppgqvvllencrmn----tg-----ek---
pgk_zymmo  indi----kgeaaakavdalnpgavallentrfy----ag-----ee---
pgk_corgl  aadv----vgedaherangltegdilllenvrfd----pr-----et-sk
pgk_mycge  sckn----tgaevkqkvqalafgeilllentrycdvndkgeivkles---
pgk_pyrwo  vedi----fgkyarerikamkpgevivlenlrfs----ae-----ev-kn
pgk_mycle  vcstdrspvggdalacverltdgdllllqnirfd----pr-----et-sk
pgk_metfe  vedi----fgcaaresirnmengdiillenvrfy----se-----ev-lk

pgk_klula  kvdgnkvkadkaavtk---freqlssl---advyvndafgtahrahssiv
pgkh_chlre kn-------ep----e---fakklaan---adlyvndafgtahrahaste
pgk_bacme  kn-------dp----e---lakafael---advyvndafgaahrahaste
pgkc_trybb -k-------ak-drea---makilasy---gdvyisdafgtahrdsatmt
pgka_crifa ---------derkrml---marilasy---advyindafgtahrdsaslt
pgkg_tryco -k-------ee-erea---makvlasy---gdifvsdafgtahrdsatmt
pgk_ecoli  kd-------de----t---lskkyaal---cdvfvmdafgtahraqasth
pgk_theth  kn-------dp----e---lsaryarl---geafvldafgsahrahasvv
pgkc_alceu kn-------sd----e---laqkmaal---cdvyvndafgtahraeatth
pgk_zymmo  kn-------dp----a---laaevakl---gdfyvndafsaahrahvste
pgk_corgl  -d-------ea-ernr---faqelaalaadngafvsdgfgvvhraqtsvy
pgk_mycge  kn-------dp----e---lakfwasl---geifvndafgtahrkhasna
pgk_pyrwo  -a-------ti-eecektffvrklsqv---idlvvndafaaahrsqpslv
pgk_mycle  -v-------dd-erla---lakqlvelvgsagafvsdgfgvvhrrqasvy
pgk_metfe  -r-------dp-kvqaethlvrklssv---vdyyindafaaahrsqpslv

pgk_klula  gfd--lpnraagfllskelqyfakalenptrpflailggakvadkiqlid
pgkh_chlre gvtkflkpsvagfllqkeldyldgavsnpkrpfvaivggskvsskitvie
pgk_bacme  giaqhi-pavagflmekeldvlskalsnperpftaivggakvkdkigvid
pgkc_trybb gipkilgngaagylmekeisyfakvlgnpprplvaivggakvsdkiqlld
pgka_crifa giprvlqqgaagylmekeisyfskvlnnpprpllaiiggaklsdkmqvle
pgkg_tryco gipkvlghgaagylmekeisyfskvlgnpprplvaivggskvsdkiqlld
pgk_ecoli  gigkfadvacagpllaaeldalgkalkeparpmvaivggskvstkltvld
pgk_theth  gvarll-payagflmekevralsrllkdperpyavvlggakvsdkigvie
pgkc_alceu giaryapiacagpllaaeidalgkalgqparplvaivagskvstkltilk
pgk_zymmo  glahklp-afagramqkelealeaalgkpthpvaavvggakvstkldvlt
pgk_corgl  diakllp-hyagglveteisvlekiaespeapyvvvlggskvsdkigvie
pgk_mycge  giakyvakscigflmekelknlsyliqspqkpfvvvlggakvsdklkvve
pgk_pyrwo  gfarikp-mimgflmekevdaltkayeseekprvyvlggakvddslkvae
pgk_mycle  dvatllp-hyagilvadeirileqltssakrpyavvlggskvsdklgvie
pgk_metfe  gfplklp-saagrlmerevktlykiiknvekpcvyilggvkiddsimimk

pgk_klula  nlld--kvdsliigggmaftfkkvlenteigds----iydaagaelvpkl
pgkh_chlre alme--kcdkiiigggmiftfyka-ralkvgss----lveddkielakkl
pgk_bacme  hlld--kvdnliiggglsytfika-lghevgks----lleedkielaksf
pgkc_trybb nmlq--ridylliggamaytflka-qgysigks----kceesklefarsl
pgka_crifa nlld--cvdslfiggglaytflrs-qgysigts----hfeeafvpfaqal
pgkg_tryco nmlq--ridylliggamaytflka-qghrigts----mceedrldlarsl
pgk_ecoli  slsk--iadqlivgggiantfiaa-qghdvgks----lyeadlvdeakrl
pgk_theth  sllp--ridrlliggamaftflka-lggevgrs----lveedrldlakdl
pgkc_alceu slad--kvdnlivgggiantfmla-aglkigks----laepdlladarai
pgk_zymmo  nlvs--kvdhliigggmantflaa-qgvdvgks----lcehelkdtvkgi
pgk_corgl  alaa--kadkiivgggmcytflaa-qghnvqqs----llqeemkatctdl
pgk_mycge  nllk--ladniligggmvntflka-kgkatans----lvekelidvakqi
pgk_pyrwo  nvlrkekadliltgglvgqlftla-kgfdlgrenikflekkgilkyvdwa
pgk_mycle  slat--kadsivlgggmcftflaa-qgfsvgks----lletemietcrsl
pgk_metfe  nilkngsadyiltsglvanvflea-sgidikeknrkilyrknykkfikma

pgk_klula  vekakknnvkivlptdfvigdkfsadantkvvtdkegips---gwqgldn
pgkh_chlre eemakakgvqlllptdvvvadkfdanantqtvp-itaipd---gwmgldi
pgk_bacme  mekakkngvnfympvdvvvaddfsndaniqvvs-iedips---dweglda
pgkc_trybb lkkaedrkvqvilpidhvchtefkavdsplit-edqnipe---ghmaldi
pgka_crifa plagsgrqvrvvlpedhvchahtrpaeapltt-tsanipd---gyagldi
pgkg_tryco lkkaedrkvqvllpvdhvchtefkavdtpvvt-adadipd---ghmaldi
pgk_ecoli  ltt-----cnipvpsdvrvatefsetapatlks-vndvka---deqildi
pgk_theth  lgraealgvrvylpedvvaaerieagvetrvfp-araipv---pymgldi
pgkc_alceu idimarrgasvpipvdvvcakefsataaatvkd-vkdvad---ddmildi
pgk_zymmo  faaaektgckihlpsdvvvakefkanppirtip-vsdvaa---demildv
pgk_corgl  lasvd----kivlpvdlvaasefnkdaekqivd-ldsipe---gwmsldi
pgk_mycge  ldkd--thnkivlaidqvmgsefkdqtgitldv-sdkiqeqyqsymsldv
pgk_pyrwo  ekildefypyvrtpvdfaidfkgerveidlls-dekrlfd---eypildi
pgk_mycle  ldtyad---vlrlpmdivvtekfvadsppqtva-adaipd---glmgldi
pgk_metfe  kklkdkygekiltpvdvainkngkridvp----id-dipn----fpiydi

pgk_klula  gpesrkafaatvaeaktivwngppgvfefapfakgtealldavvassq-a
pgkh_chlre gpdsvktfndaladaktvvwngpmgvfefpqvrqrtvsiantlagltp-k
pgk_bacme  gpktreiyadviknsklviwngpmgvfeldafangtkavaealaea---t
pgkc_trybb gpktiekyvqtigkcksaiwngpmgvfemvpyskgtfaiakamgrgtheh
pgka_crifa gpltiqsithlvrqcssviwngplgmfempyyafgtfsiarvvsqssaak
pgkg_tryco gpktianyvetigkcksaiwngpmgvfemtpyskgtfavakamgdctqkn
pgk_ecoli  gdasaqelaeilknaktilwngpvgvfefpnfrkgteivanaia-dse--
pgk_theth  gpktreafaralegartvfwngpmgvfevppfdegtlavgqaiaal---e
pgkc_alceu gpktaamlaeqlkaagtivwngpvgvfefdqfgngtrvlaqaia-esk--
pgk_zymmo  gpkavaaltevlkasktlvwngplgafeiepfdkatvalakeaaaltkag
pgk_corgl  gpesvknfgevlstaktifwngpmgvfefaafsegtrasprpssmqhagn
pgk_mycge  gsktialfesylktaktifwngplgvfeftnfakgtskigeiiakn---k
pgk_pyrwo  gsrtvekyreillkariivangpmgvfereefavgtigvfkaige----s
pgk_mycle  gpesvkrfatllsnastifwngpmgvfefpayaagtrgvaeaiva-vtgk
pgk_metfe  gmetikiyaekireaktifangpagvfeeqqfsigtedllnaias----s

pgk_klula  gnnviigggdtatvakkygvv-dkishvstgggaslellegkelpgvtfl
pgkh_chlre gcitiigggdsvaaveqagva-ekmshistgggaslellegkvlpgvaal
pgk_bacme  dtysvigggdsaaavekfnla-dkmshistgggaslefmegkelpgvval
pgkc_trybb glmsiigggdsasaaelsgea-krmshvstgggaslellegktlpgvtvl
pgka_crifa gttsivgggdtasammksgea-ahishistggnaslellegkvlaavavl
pgkg_tryco glmsiigggdsasaaeqsgea-trmshvstgggaslellegktlpgvail
pgk_ecoli  -afsiagggdtlaaidlfgia-dkisyistgggaflefvegkvlpavaml
pgk_theth  gaftvvgggdsvaavnrlglk-erfghvstgggasleflekgtlpglevl
pgkc_alceu -afsiagggdtlaaiakhgia-drvgyistgggafleflegktlpalavl
pgk_zymmo  slisvagggdtvaalnhagva-kdfsfvstaggaflewmegkelpgvkal
pgk_corgl  dafsvvgggdsaasvrvlglnedgfshistgggasleylegkelpgvail
pgk_mycge  tafsvigggdsaaavkqmqls-dqfsfistgggaslaliggeelvgisdi
pgk_pyrwo  pafsviggghsiasiykynit--gishistgggamltffageklpvleal
pgk_mycle  gafsvvgggdsaaamralslpegsvshlstgggasleylegktlpgievl
pgk_metfe  nafsviagghlaaaaekmgis-nkinhissgggaciaflsgeelpaikvl

pgk_klula  snk
pgkh_chlre dek
pgk_bacme  ndk
pgkc_trybb dek
pgka_crifa dnk
pgkg_tryco ddk
pgk_ecoli  eer
pgk_theth  e--
pgkc_alceu aqr
pgk_zymmo  ea-
pgk_corgl  aq-
pgk_mycge  qkn
pgk_pyrwo  ---
pgk_mycle  gre
pgk_metfe  eea



